DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP5MC2 and VhaPPA1-1

DIOPT Version :10

Sequence 1:XP_054228230.1 Gene:ATP5MC2 / 517 HGNCID:842 Length:198 Species:Homo sapiens
Sequence 2:NP_652010.1 Gene:VhaPPA1-1 / 45247 FlyBaseID:FBgn0028662 Length:212 Species:Drosophila melanogaster


Alignment Length:215 Identity:48/215 - (22%)
Similarity:79/215 - (36%) Gaps:60/215 - (27%)


- Green bases have known domain annotations that are detailed below.


Human     4 LILYVAITLSVAERLVGPGHACAEPSFRSSRCSAPLCLLCSGSSSPATAPHPLKMFACSKFVSTP 68
            |.|.||..|::...:.|.|...:...|.:|  |.|....|.|.....:    |.:...:..:.|.
  Fly    16 LFLAVATILTLYFVMTGKGERVSVGWFLAS--SNPYMWACLGIGLSVS----LSVVGAALGIHTT 74

Human    69 SLVKSTSQLLSRPLSAVV---LKRPEILTDESLS-----SLAVSCPLTSLVSSRSFQTSAISRDI 125
            .             :::|   :|.|.|.|...:|     ::|:...:|::|.|...:..::...:
  Fly    75 G-------------TSIVGGGVKAPRIKTKNLISVIFCEAVAIYGLITAIVLSGQLEQFSMETAL 126

Human   126 DTAA----------KFIGAGAA----------TVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLF 170
            ..||          ...|||.|          .||:.||||.:..         |.|.:|..::.
  Fly   127 SQAAIQNTNWFSGYLIFGAGLAVGLVNLFCGIAVGIVGSGAALSD---------AANAALFVKIL 182

Human   171 SYAILGFALSEAMGLFCLMV 190
            ...|.|    .|:|||.|:|
  Fly   183 IVEIFG----SAIGLFGLIV 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5MC2XP_054228230.1 ATP9 124..198 CDD:164765 23/87 (26%)
VhaPPA1-1NP_652010.1 ATP-synt_Vo_c_ATP6F_rpt1 51..113 CDD:349417 12/78 (15%)
ATP-synt_Vo_c_ATP6F_rpt2 138..202 CDD:349418 21/74 (28%)

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