DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATP5MC2 and Vha16-3

DIOPT Version :10

Sequence 1:XP_054228230.1 Gene:ATP5MC2 / 517 HGNCID:842 Length:198 Species:Homo sapiens
Sequence 2:NP_729706.1 Gene:Vha16-3 / 317846 FlyBaseID:FBgn0028667 Length:158 Species:Drosophila melanogaster


Alignment Length:32 Identity:8/32 - (25%)
Similarity:13/32 - (40%) Gaps:6/32 - (18%)


- Green bases have known domain annotations that are detailed below.


Human   144 PLSRAAGRLSIHSLEAQSLRC------LQPFC 169
            |..|..||::|....|....|      ::.:|
  Fly   204 PTCRGVGRVTIPPFTASCQTCKGTGHIIKEYC 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5MC2XP_054228230.1 ATP9 124..198 CDD:164765 8/32 (25%)
Vha16-3NP_729706.1 V_ATP_synt_C 16..121 CDD:130170
ATP-synt_Vo_c_ATP6C_rpt2 91..156 CDD:349416
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.