DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDHB and pdhb

DIOPT Version :10

Sequence 1:NP_000916.2 Gene:PDHB / 5162 HGNCID:8808 Length:359 Species:Homo sapiens
Sequence 2:NP_998319.1 Gene:pdhb / 406428 ZFINID:ZDB-GENE-040426-2173 Length:359 Species:Danio rerio


Alignment Length:359 Identity:301/359 - (83%)
Similarity:331/359 - (92%) Gaps:0/359 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAAVSGLVRRPLREVSGLLKRRFHWTAPAALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDG 65
            ||::...:|.....||.:|:|.||.|.|||:|||||||:||.|||||||||:|||||||||||||
Zfish     1 MASLRCFLRSGKSAVSAVLRREFHRTPPAAVQVTVRDALNQAMDEELERDERVFLLGEEVAQYDG 65

Human    66 AYKVSRGLWKKYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKT 130
            ||||||||||||||||||||||:||||||||||||||||||||||||||||||||||||||||||
Zfish    66 AYKVSRGLWKKYGDKRIIDTPITEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKT 130

Human   131 YYMSGGLQPVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNN 195
            ||||.|||.|||||||||||||||||||||||||||||||||||:||||||||:||:|:||||:|
Zfish   131 YYMSAGLQAVPIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVLSPWNSEDARGLLKAAIRDDN 195

Human   196 PVVVLENELMYGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEG 260
            |||.||||||||||||...|.|||||:||||||||||||.|||:|||||.||.||:|||||:|||
Zfish   196 PVVFLENELMYGVPFEMSEEVQSKDFVIPIGKAKIERQGNHITLVSHSRMVGLCLDAAAVLAKEG 260

Human   261 VECEVINMRTIRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRV 325
            :||||||:|:|||:|.:|||.|:.|||||||||||||||||||||.||||||||||:||||||||
Zfish   261 IECEVINLRSIRPLDADTIETSITKTNHLVTVEGGWPQFGVGAEILARIMEGPAFNYLDAPAVRV 325

Human   326 TGADVPMPYAKILEDNSIPQVKDIIFAIKKTLNI 359
            ||.|:|||||||||||||||:|||||::|||||:
Zfish   326 TGVDIPMPYAKILEDNSIPQIKDIIFSVKKTLNV 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDHBNP_000916.2 PRK11892 <32..355 CDD:237011 283/322 (88%)
pdhbNP_998319.1 PLN02683 8..356 CDD:215368 295/347 (85%)

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