DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDHB and pdhb-1

DIOPT Version :10

Sequence 1:NP_000916.2 Gene:PDHB / 5162 HGNCID:8808 Length:359 Species:Homo sapiens
Sequence 2:NP_500340.1 Gene:pdhb-1 / 177108 WormBaseID:WBGene00015413 Length:352 Species:Caenorhabditis elegans


Alignment Length:349 Identity:231/349 - (66%)
Similarity:282/349 - (80%) Gaps:1/349 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    12 LREVSGLLKRRFHWTAP-AALQVTVRDAINQGMDEELERDEKVFLLGEEVAQYDGAYKVSRGLWK 75
            ||:...|...|...|:. ||..:|||||:||.||||::||::|||:||||||||||||:|:||||
 Worm     3 LRKCGNLFVARLAGTSTRAASTMTVRDALNQAMDEEIKRDDRVFLMGEEVAQYDGAYKISKGLWK 67

Human    76 KYGDKRIIDTPISEMGFAGIAVGAAMAGLRPICEFMTFNFSMQAIDQVINSAAKTYYMSGGLQPV 140
            |:||||::||||:||||||||||||.|||||||||||||||||||||:|||||||||||.|..||
 Worm    68 KHGDKRVVDTPITEMGFAGIAVGAAFAGLRPICEFMTFNFSMQAIDQIINSAAKTYYMSAGRVPV 132

Human   141 PIVFRGPNGASAGVAAQHSQCFAAWYGHCPGLKVVSPWNSEDAKGLIKSAIRDNNPVVVLENELM 205
            ||||||||||:|||||||||.|:|||.||||||||.|:::||||||:|:||||:||||.||||::
 Worm   133 PIVFRGPNGAAAGVAAQHSQDFSAWYAHCPGLKVVCPYSAEDAKGLLKAAIRDDNPVVFLENEIL 197

Human   206 YGVPFEFPPEAQSKDFLIPIGKAKIERQGTHITVVSHSRPVGHCLEAAAVLSKEGVECEVINMRT 270
            ||..|....|..|.||::|||||||||.|.|:|:||:||.|...||||..|...||..||||:|:
 Worm   198 YGQSFPVGDEVLSDDFVVPIGKAKIERAGDHVTIVSYSRGVEFSLEAAKQLEAIGVSAEVINLRS 262

Human   271 IRPMDMETIEASVMKTNHLVTVEGGWPQFGVGAEICARIMEGPAFNFLDAPAVRVTGADVPMPYA 335
            :||.|.|:|..||.||:|||:||.|||..|:|:||.|::||...|:.||||.:||||.||||||.
 Worm   263 LRPFDFESIRQSVHKTHHLVSVETGWPFAGIGSEIAAQVMESDVFDQLDAPLLRVTGVDVPMPYT 327

Human   336 KILEDNSIPQVKDIIFAIKKTLNI 359
            :.||..::|..:.::.|:||:|||
 Worm   328 QTLEAAALPTAEHVVKAVKKSLNI 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDHBNP_000916.2 PRK11892 <32..355 CDD:237011 219/322 (68%)
pdhb-1NP_500340.1 PRK11892 <15..347 CDD:237011 222/331 (67%)

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