DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATP5MC1 and atp5mc3

DIOPT Version :10

Sequence 1:NP_005166.1 Gene:ATP5MC1 / 516 HGNCID:841 Length:136 Species:Homo sapiens
Sequence 2:NP_001005087.1 Gene:atp5mc3 / 448663 XenbaseID:XB-GENE-853227 Length:142 Species:Xenopus tropicalis


Alignment Length:140 Identity:105/140 - (75%)
Similarity:112/140 - (80%) Gaps:7/140 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     4 AGALFIS-PALIRCCTRGLIRPVSASFLNSPV------NSSKQPSYSNFPLQVARREFQTSVVSR 61
            |.|.|:| |:|||..:|.|.||||||.|:.|.      |::......|...|:..||||||.|||
 Frog     3 ACAKFVSTPSLIRAGSRVLYRPVSASVLSRPEVRTGEGNATLLSGTPNTFTQLVLREFQTSAVSR 67

Human    62 DIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCL 126
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog    68 DIDTAAKFIGAGAATVGVAGSGAGIGTVFGSLIIGYARNPSLKQQLFSYAILGFALSEAMGLFCL 132

Human   127 MVAFLILFAM 136
            ||||||||||
 Frog   133 MVAFLILFAM 142

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5MC1NP_005166.1 ATP9 62..136 CDD:164765 73/73 (100%)
atp5mc3NP_001005087.1 ATP9 68..142 CDD:164765 73/73 (100%)

Return to query results.
Submit another query.