DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PDE6B and Pde11

DIOPT Version :10

Sequence 1:XP_054206142.1 Gene:PDE6B / 5158 HGNCID:8786 Length:1022 Species:Homo sapiens
Sequence 2:NP_609885.2 Gene:Pde11 / 35107 FlyBaseID:FBgn0085370 Length:1451 Species:Drosophila melanogaster


Alignment Length:940 Identity:270/940 - (28%)
Similarity:435/940 - (46%) Gaps:186/940 - (19%)


- Green bases have known domain annotations that are detailed below.


Human    39 HCRCQAGDTQDRPSMGFLGVHACLEQQRLQGQAATMSLSEEQARSFLDQNPDFARQYFGKKLSPE 103
            |...|||......|:|..|        ...|.....||..........|.|     |:.....|:
  Fly   340 HSHYQAGGAVGSSSLGSTG--------GASGAGGAPSLGGSGGAGNGHQYP-----YYHCHQRPQ 391

Human   104 NVAAACEDGCPPDCDSLRDLCQVEESTALLELVQDMQESINMERVVFKVLRRLCTLLQADRCSLF 168
            .:             |..:|.|::|...:.|||:|:...:.:..:..|:|:.:..||.|||.|||
  Fly   392 RL-------------SRNELKQLDEKELIFELVKDICNELEVRTLCHKILQNVSILLNADRGSLF 443

Human   169 MYRQR----NGVAE-LATRLFSVQPDSVLEDCLVPPDSEIVFPLDIGVVGHVAQTKKMVNVEDVA 228
            :.:.|    :|:.: |.::||.|.|.|.:|:  :....|:......|:.||||::.:.||:.|..
  Fly   444 LVQGRCNGPDGLKKCLVSKLFDVCPRSTVEE--MEQQDEVRVAWGTGIAGHVAESGEPVNIPDAY 506

Human   229 ECPHFSSFADELTDYKTKNMLATPIMNGK-DVVAVIMAVNKLNGPFFTSEDEDVFLKYLNFATLY 292
            :...|:...|.||.|:||.:|..||.:.. ||:.|...:||:||..|:..||.||..||.|..:.
  Fly   507 QDERFNCEIDSLTGYRTKALLCMPIKDSSGDVIGVAQVINKMNGECFSEIDEKVFSSYLQFCGIG 571

Human   293 LK---IYHLSYLHNCETRRGQVLLWSANKVFEELTDIERQFHKAFYTVRAYLNCERYSVGLLDMT 354
            |:   :|..|.|   |.:|.||||..|..:|||.:.||....:....:::.:.|:|..:      
  Fly   572 LRNAQLYEKSQL---EIKRNQVLLDLARMIFEEQSTIEHMVFRILTHMQSLIQCQRVQI------ 627

Human   355 KEKEFFDVWSVLMGESQPYSGPRTPDGREIVFYKVIDYILH--GKEEIKVIPTPSADHWALASGL 417
                      :|:.|:...|           |.:|.|:..:  .:||.....:|....:.:..|:
  Fly   628 ----------LLVHEADKGS-----------FSRVFDFEANDLSEEEATSRTSPYESRFPINIGI 671

Human   418 PSYVAESGFICNIMNASADEMFKFQEGALDD-SGWLIKNVLSMPIVNKKEEIVGVATFYNRKDGK 481
            ..:||.:|...|:.||..|:.|   :.::|: |.:..:::|.|.|.|...:|:||....|:.:..
  Fly   672 TGHVATTGETVNVPNAYEDDRF---DASVDENSCFKHRSILCMAIKNSLGQIIGVIQLINKFNEL 733

Human   482 PFDEQDEVLMESLTQFLGWSVMNTDTYDKMNKLENRKDIAQDMVLYHVKCDRDEIQLILPTRARL 546
            .|.:.||..:|:...|.|..:.||..|:|......::.:..:::.||                  
  Fly   734 DFTKNDENFVEAFAIFCGMGIHNTHMYEKAIVAMAKQSVTLEVLSYH------------------ 780

Human   547 GKEPADCDEDELGEILKEELPGPTTFDIYEFHFSDLECTELDLVKCGIQMYYELGVVRKFQIPQE 611
                |....||...:.:..:|....|.:::|.|.|:...:.|.:|..::|:.:|..|.:|.|..|
  Fly   781 ----ASATMDEAHRLRRLRVPSAVHFRLHDFKFDDIHFEDDDTLKACLRMFLDLDFVERFHIDYE 841

Human   612 VLVRFLFSISKGYRRITYHNWRHGFNVAQTMFTLLMTGKLKSYYTDLEAFAMVTAGLCHDIDHRG 676
            ||.|:|.|:.|.||.:|||||||.|||||.||.:|.|.:....:.::|..|::...||||:||||
  Fly   842 VLCRWLLSVKKNYRNVTYHNWRHAFNVAQMMFAILTTTQWWKIFGEIECLALIIGCLCHDLDHRG 906

Human   677 TNNLYQMKSQNPLAKLHGSSILERHHLEFGKFLLSEETLNIYQNLNRRQHEHVIHLMDIAIIATD 741
            |||.:|:|:.:|||:|:.:|.:|.||.:....:|:.....|..||:...:..||.:::.||::||
  Fly   907 TNNSFQIKASSPLAQLYSTSTMEHHHFDQCLMILNSPGNQILANLSSDDYCRVIRVLEDAILSTD 971

Human   742 LALYFKCAPSGRGRLAGRAGSLGPPADTGAQRRHSPGDAAPDSVPARRPRAPRMGPRSGSAPPCR 806
            ||:|||                                                           
  Fly   972 LAVYFK----------------------------------------------------------- 977

Human   807 RALGAGSPHLLPPAPPLFPGFRKRAMFQKIVDESKNYQDKKSWVEYLSLETTRKEIVMAMMMTAC 871
                                  ||..|.:.|.:..:|     ||    .|..| .::.||.||.|
  Fly   978 ----------------------KRGPFLESVSQPTSY-----WV----AEEPR-ALLRAMSMTVC 1010

Human   872 DLSAITKPWEVQSKVALLVAAEFWEQGDLERTVLDQQPIPMMDRNKAAELPKLQVGFIDFVCTFV 936
            ||||||||||::.:||.||::||:||||:|:..|:..||.:|:|.|..|||.:||.|||.:|..:
  Fly  1011 DLSAITKPWEIEKRVADLVSSEFFEQGDMEKQELNITPIDIMNREKEDELPMMQVNFIDSICLPI 1075

Human   937 YKEFSRFHEEILPMFDRLQNNRKEWKALAD 966
            |:.|:...:::.|:.:.:::||..|..|||
  Fly  1076 YEAFATLSDKLEPLVEGVRDNRGHWIDLAD 1105

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDE6BXP_054206142.1 GAF 144..303 CDD:214500 57/167 (34%)
GAF 325..512 CDD:214500 42/189 (22%)
PDEase_I 629..954 CDD:459723 106/324 (33%)
Pde11NP_609885.2 GAF 420..582 CDD:214500 55/163 (34%)
GAF 611..762 CDD:214500 39/180 (22%)
PDEase_I 859..1093 CDD:459723 106/324 (33%)

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