DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment LARP7 and Larp7

DIOPT Version :10

Sequence 1:NP_001357903.1 Gene:LARP7 / 51574 HGNCID:24912 Length:595 Species:Homo sapiens
Sequence 2:NP_524795.2 Gene:Larp7 / 44900 FlyBaseID:FBgn0260771 Length:595 Species:Drosophila melanogaster


Alignment Length:647 Identity:175/647 - (27%)
Similarity:285/647 - (44%) Gaps:148/647 - (22%)


- Green bases have known domain annotations that are detailed below.


Human     4 ESGNQEKVMEEESTEKKKEVEKKKRSRVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGY 68
            |..::|...|:.|.:||....|:||    .:...|..|::|:||||||.||||||..:|  :|.|
  Fly    33 EENSKEPAPEDASPDKKDGGRKRKR----HLFNSIRGQMEFYFGDANLSKDRFLRRYVE--QDPY 91

Human    69 VDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRIRRKKPLGERPKDEDERTVYVELLP 133
            |.:.:.::|||:|.||.|.:.||:||.:|.::|||....:::|:..|.:: :|.:::|:|||.||
  Fly    92 VPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELDETELKVKRRTKLPDQ-RDVNDKTLYVEALP 155

Human   134 KNVNHSWIERVFGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKPG 198
            .|..|.|::.||.:.|.|.|:|:|||..|...|.|||:|||                     |.|
  Fly   156 ANATHDWLKEVFSRYGPVAYVSLPHYPGTKKIKEFAFIEFE---------------------KSG 199

Human   199 IFPKTVKN-KPIPALRVVEEKKKKKKKKGRMKKEDNIQAKEENMDTSNTSISKMKRSRPTSEGSD 262
            ...|.||. ..|..:..||............:::..||.|.|               :|.||...
  Fly   200 SLEKAVKAFAQIQGVLSVETDPSDLASVRSFQQQQQIQQKAE---------------QPQSEAEQ 249

Human   263 IESTEPQKQCSKKKKKRDRVEASSLPEVRTGKRKRSSSEDAESLAPRSKVKKIIQKDIIKEASEA 327
            :|.  |::...::...:||.|...:..|:..:.:.|.:..|.                 :.|||.
  Fly   250 VEL--PKRNLKREATDKDREEIHEVKRVKLEEGQPSETSTAG-----------------ETASET 295

Human   328 SKENRAPCLNGELFYLFQDIEISTEEEKDTGDLKDSSLLKTKRKHKKKH-KERHKMGEEVIPLRV 391
            ..|..|              |.|.:|:|......|.:..|.:||.|||. .::..:....:.|:|
  Fly   296 DAEGTA--------------EASEQEDKTEATDGDEAAKKRRRKRKKKAIVDKPNIEPSALELKV 346

Human   392 LSKSEWMDLKKEYLALQKASMASLKKTI-------------------------SQI-KSESEMET 430
            |.|:.|..::.:||.||:..::..|..:                         ||: ::..|.||
  Fly   347 LPKTSWSSMRNKYLNLQRRIVSEAKSKLWRENHPQNQQHPHHQQTSHPNHPKPSQLPEAVKEEET 411

Human   431 DSGVPQNTG----------MKNEKTANR-----------EECRTQEKVNATGP--QFVSGVIVKI 472
            ...||.:.|          .|..|..::           |..:::|......|  ::..|:||:.
  Fly   412 GGEVPSDGGEGAVEAAPVPAKRRKAVHKMNMNFYGAGGVESTKSEEPSQERTPLFKYEPGLIVEC 476

Human   473 ISTEPLPGRKQVRDTLAAISEVLYVDLLEGDTECHARFKTPEDAQAVINAYTEINKKHC--WKLE 535
            ...:|....|:.:..:....::.|||:.|||.....|..||..|:.::.   ::|   |  .:|:
  Fly   477 SLLKPCTNVKEFKAEMRQYPDIKYVDIKEGDQVALLRLGTPAAAEELLR---QVN---CSERQLK 535

Human   536 ILSGDHEQRYWQKILVDRQAKLNQP--REKKRGTEKLITKAEKIRLAKTQQASKHIRFSEYD 595
            :|||..|..||:||..||:|||::.  .::|||.||:           .:...|||:|.:.|
  Fly   536 VLSGQQETLYWRKIEQDREAKLSKKVRVQQKRGREKV-----------GKMLGKHIKFDDGD 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LARP7NP_001357903.1 LARP_7 30..111 CDD:153401 34/80 (43%)
RRM1_LARP7 126..205 CDD:409732 29/78 (37%)
RRM2_LARP7 467..548 CDD:409958 24/82 (29%)
Larp7NP_524795.2 LA 57..135 CDD:128955 35/83 (42%)
RRM1_LARP7 148..220 CDD:409732 34/92 (37%)
RRM2_LARP7 471..548 CDD:409958 24/82 (29%)

Return to query results.
Submit another query.