DRSC/TRiP Functional Genomics Resources

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Protein Alignment LARP7 and Larp4B

DIOPT Version :10

Sequence 1:NP_001357903.1 Gene:LARP7 / 51574 HGNCID:24912 Length:595 Species:Homo sapiens
Sequence 2:NP_647793.1 Gene:Larp4B / 38399 FlyBaseID:FBgn0035424 Length:1531 Species:Drosophila melanogaster


Alignment Length:196 Identity:54/196 - (27%)
Similarity:86/196 - (43%) Gaps:52/196 - (26%)


- Green bases have known domain annotations that are detailed below.


Human    30 RVKQVLADIAKQVDFWFGDANLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAL 94
            ::||:|   |.|::::|...||..|.:|..|::.  |.||.|..:..||.::|||.|..||...|
  Fly   267 KLKQML---ATQLEYYFSRENLANDTYLLSQMDS--DQYVPIYTVARFNLVRKLTNDINLITEVL 326

Human    95 RSSAVVELDLEGTRIR--RKKPL-------GERPKDEDERTVYVELLPKNV------NHSWIERV 144
            |.|..|::|.:|.|:|  ||:.:       ...|.|:.:.....|..|:.:      |:||    
  Fly   327 RESPNVQVDDKGLRVRPNRKRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSW---- 387

Human   145 FGKCGNVVYISIPHYKSTGDPKGFAFVEFETKEQAAKAIEFLNNPPEEAPRKP---GIFPKTVKN 206
                                     ::.||:.|.|.||.::|....:|...||   .|.||:..|
  Fly   388 -------------------------YITFESDEDAQKAYKYLREEVKEFQGKPIMARIKPKSFIN 427

Human   207 K 207
            :
  Fly   428 R 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
LARP7NP_001357903.1 LARP_7 30..111 CDD:153401 31/82 (38%)
RRM1_LARP7 126..205 CDD:409732 18/87 (21%)
RRM2_LARP7 467..548 CDD:409958
Larp4BNP_647793.1 LARP_4_5_like 269..343 CDD:153400 30/78 (38%)
RRM_LARP4_5_like 348..423 CDD:409864 18/103 (17%)
Blue background indicates that the domain is not in the aligned region.

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