Sequence 1: | NP_001334757.1 | Gene: | PDGFRA / 5156 | HGNCID: | 8803 | Length: | 1114 | Species: | Homo sapiens |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_651349.1 | Gene: | Cad96Ca / 43026 | FlyBaseID: | FBgn0022800 | Length: | 773 | Species: | Drosophila melanogaster |
Alignment Length: | 417 | Identity: | 133/417 - (31%) |
---|---|---|---|
Similarity: | 199/417 - (47%) | Gaps: | 110/417 - (26%) |
- Green bases have known domain annotations that are detailed below.
Human 610 RWEFPRDGLVLGRVLGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMT 674
Human 675 HLGPHLNIVNLLGACTKSGPIYIITEYCFYGDLVNYLHKNRDSFLSHHPEKPKKELDIFGLNPAD 739
Human 740 ESTRSYVILSFENNGDYMDMKQADTTQYVPMLERKEVSKYSDIQRSLYDRPASYKKKSMLDSEVK 804
Human 805 NLLSDDNSEG----LTLLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLA 865
Human 866 RDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMMVDSTF 930
Human 931 YNKIKSGYRMAKPDHATSEVYEIMVKCWNSEPEKRPSFYHLSEIVENLLPGQYKKSYEKIHLDFL 995
Human 996 KSDHPAVARMRVDSDNAYIGVTYKNEE 1022 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
PDGFRA | NP_001334757.1 | None | |||
Cad96Ca | NP_651349.1 | Cadherin_repeat | 65..164 | CDD:206637 | |
STYKc | 470..741 | CDD:214568 | 119/360 (33%) | ||
PTKc | 474..742 | CDD:270623 | 118/357 (33%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG0200 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR24416 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |