DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB14 and Rab3

DIOPT Version :10

Sequence 1:NP_057406.2 Gene:RAB14 / 51552 HGNCID:16524 Length:215 Species:Homo sapiens
Sequence 2:NP_523687.1 Gene:Rab3 / 36127 FlyBaseID:FBgn0005586 Length:220 Species:Drosophila melanogaster


Alignment Length:213 Identity:77/213 - (36%)
Similarity:123/213 - (57%) Gaps:7/213 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     4 APYNYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTA 68
            |..|:.|:||.:|||:..|||:..|.::.:..|.:....|:|::|..:.:....:::||||||||
  Fly    14 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVKLQIWDTA 78

Human    69 GQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRD 133
            ||||:|.:|.:|||||.|.:::||:|...::|.:..|:|..:..:..|..:||:|||.|:|.||.
  Fly    79 GQERYRTITTAYYRGAMGFILMYDVTNEDSFNSVQDWVTQIKTYSWDNAQVILVGNKCDMEDQRV 143

Human   134 VTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQ 198
            :::|..:|.|::.|:.|.|.|||...||:..|......|...:.: |||.:....|     ...:
  Fly   144 ISFERGRQLADQLGVEFFETSAKENVNVKAVFERLVDIICDKMSE-SLDADPTLVG-----GGQK 202

Human   199 GGRLTSEPQ-PQREGCGC 215
            |.|||.:|| .....|.|
  Fly   203 GQRLTDQPQGTPNANCNC 220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB14NP_057406.2 Rab14 10..175 CDD:133322 63/164 (38%)
Switch 1. /evidence=ECO:0000269|PubMed:26032412, ECO:0007744|PDB:4D0G 42..47 2/4 (50%)
Switch 2. /evidence=ECO:0000269|PubMed:26032412, ECO:0007744|PDB:4D0G 68..77 6/8 (75%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..215 8/27 (30%)
Rab3NP_523687.1 Rab3 21..185 CDD:206657 62/163 (38%)

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