DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RAB14 and Rab30

DIOPT Version :10

Sequence 1:NP_057406.2 Gene:RAB14 / 51552 HGNCID:16524 Length:215 Species:Homo sapiens
Sequence 2:NP_609094.1 Gene:Rab30 / 33988 FlyBaseID:FBgn0031882 Length:223 Species:Drosophila melanogaster


Alignment Length:210 Identity:88/210 - (41%)
Similarity:134/210 - (63%) Gaps:4/210 - (1%)


- Green bases have known domain annotations that are detailed below.


Human     7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQE 71
            :|.::||.:::|:.||||:||:.:||:..|......||||:|..:.:||.|:|||||||||||||
  Fly     3 DYKFLFKIVLVGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEVEGEKIKLQIWDTAGQE 67

Human    72 RFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTY 136
            |||::|:||||.|...::||||:.:.|::.|..||.:.:...|...:.||:|||.|.: .|::..
  Fly    68 RFRSITQSYYRSAHALILVYDISCQPTFDCLPDWLREIQEYANSKVLKILVGNKTDRD-DREIPT 131

Human   137 EEAKQFAEENGLLFLEASAKTGENVEDAFLE-AAKKIYQ-NIQDGSLDLNAAESGVQHKPSAPQG 199
            :..::||:::.:.|||.|||..||||..|.| ||:.|.| ..:|||....||.:..|.:.|:...
  Fly   132 QIGEEFAKQHDMYFLETSAKEAENVERLFYEIAAELIGQARSKDGSSSAAAAAAQRQSEGSSIGL 196

Human   200 GRLTSEPQPQREGCG 214
            |..::: ..|...||
  Fly   197 GSFSAK-AAQSNCCG 210

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB14NP_057406.2 Rab14 10..175 CDD:133322 76/166 (46%)
Switch 1. /evidence=ECO:0000269|PubMed:26032412, ECO:0007744|PDB:4D0G 42..47 3/4 (75%)
Switch 2. /evidence=ECO:0000269|PubMed:26032412, ECO:0007744|PDB:4D0G 68..77 7/8 (88%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..215 6/27 (22%)
Rab30NP_609094.1 Rab30 1..168 CDD:133314 75/165 (45%)

Return to query results.
Submit another query.