DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment VPS54 and vps54

DIOPT Version :10

Sequence 1:NP_057600.2 Gene:VPS54 / 51542 HGNCID:18652 Length:977 Species:Homo sapiens
Sequence 2:XP_002939365.2 Gene:vps54 / 100380095 XenbaseID:XB-GENE-1013521 Length:981 Species:Xenopus tropicalis


Alignment Length:978 Identity:760/978 - (77%)
Similarity:869/978 - (88%) Gaps:1/978 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MASSHSSSPVPQGSSSDVFFKIEVDPSKHIRPVPSLPDVCPKEPTGDSHSLYVAPSLVTDQHRWT 65
            ||||||||.||..:|:..|:|..:.|::.:..|.|||||||||||||:.||...||:|.|||:||
 Frog     4 MASSHSSSLVPHSNSNKAFYKKGLQPAQQVGMVRSLPDVCPKEPTGDTKSLRDEPSVVADQHKWT 68

Human    66 VYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVYQQEISQREKI 130
            :|:|||||||||||||||||||||||||||.|||::||:||.|||.|:||.|..|.|:...|||.
 Frog    69 IYNSKVNLPAALNDPRLAKRESDFFTKTWGQDFVESEVLPSPYLPAITKEQFLSYSQQTISREKN 133

Human   131 HERCKNICPPKDTFERTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFNSVLPWSHFNTAGGKG 195
            ||:||::||.|..|:|.......|||.||||||||||||||||:||||||:|||||||::|||||
 Frog   134 HEKCKSVCPLKVDFDRPAYSHVLKSRADLEQVPKIFMKPDFALEDSLTFNAVLPWSHFSSAGGKG 198

Human   196 NRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLRKTSQAVKMLRDKIA 260
            :|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:
 Frog   199 SRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHELQDYLRKTSQAVKMLRDKIS 263

Human   261 QIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQPTVQVLLSTSEFVGALDLIATTQEV 325
            |||:|||||||.|||.|||||||:|:||||||||||||||||||:||||||:|||||||||||||
 Frog   264 QIDRVMCEGSLRILRQALTRNNCIKIYNKLKLMATVHQTQPTVQLLLSTSEYVGALDLIATTQEV 328

Human   326 LQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFSTYSHSDLNRPLEDDCQVLEEERLISLVFGLL 390
            ||||||||||||||.|||||:|||||||:|:||::|:.||||||||:|..|:|||||:|||||:|
 Frog   329 LQQELQGIHSFRHLSSQLCEMEKLIDKMIISEFTSYARSDLNRPLEEDSHVVEEERLVSLVFGML 393

Human   391 KQRKLNFLEIYGEKMVITAKNIIKQCVINKVSQTEEIDTDVVVKLADQMRMLNFPQWFDLLKDIF 455
            |||||:|.|||.::|:.||||||||||:|.|||.||||::||.||.||:||:||.|||.||::||
 Frog   394 KQRKLDFFEIYSDEMMATAKNIIKQCVVNTVSQIEEIDSEVVTKLTDQIRMMNFSQWFGLLQNIF 458

Human   456 SKFTIFLQRVKATLNIIHSVVLSVLDKNQRTRELEEISQQKNAAKDNSLDTEVAYLIHEGMFISD 520
            ||||||::||||||::|.:|||.|||||||.||:|.::.|:|..:::::|.|:|||.|||:||||
 Frog   459 SKFTIFIERVKATLSVIRNVVLMVLDKNQRVREMEMLAAQQNLRRESNVDNELAYLTHEGLFISD 523

Human   521 AFGEGELTPIAVDTTSQRNASP-NSEPCSSDSVSEPECTTDSSSSKEHTSSSAIPGGVDIMVSED 584
            |||||||...|..|..|||.|| :|||..||:||:||||||||||||||..|...||::|:::|:
 Frog   524 AFGEGELPNAATSTNFQRNTSPSSSEPSGSDTVSDPECTTDSSSSKEHTLPSVTQGGIEIILTEE 588

Human   585 MKLTDSELGKLANNIQELLYSASDICHDRAVKFLMSRAKDGFLEKLNSMEFITLSRLMETFILDT 649
            |||||.||||:||:||||||.||||||||.||||::|||:||||||||.||::|||.:|.|:|.|
 Frog   589 MKLTDLELGKIANSIQELLYDASDICHDRCVKFLLARAKEGFLEKLNSAEFVSLSRAVEAFVLGT 653

Human   650 EQICGRKSTSLLGALQSQAIKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSLSDGKIA 714
            |:||||:|.||.|||||||.|||||||:||||||||||||||||||||||||||||||:.||||.
 Frog   654 EKICGRRSMSLRGALQSQANKFVNRFHDERKTKLSLLLDNERWKQADVPAEFQDLVDSIKDGKIV 718

Human   715 LPEKKSGATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKY 779
            |||:|||.||||||.:.|.|:||:||||||||||||||||||.|||:||||||||||||||||||
 Frog   719 LPERKSGGTEERKPTDFLTVDGQKYAVVGTVLLLIRIILEYCSCVDDIPSVTTDMLTRLSDLLKY 783

Human   780 FNSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLPPKQYSMLRHFD 844
            |||||||||||||||||||||||||||||||||||||||||||:||||||||:.|||||||||||
 Frog   784 FNSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPLIRAHFEARMQPKQYSMLRHFD 848

Human   845 HITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMTKMHEAIFDLLPEEQ 909
            ||||||:|||||||||||.|||.||:||||||||||||||.|||.|||||.||||||:|||||||
 Frog   849 HITKDYNDHIAEISAKLVTIMDGLFEKLLSKYEVKAPVPSTCFRTICKQMAKMHEAIYDLLPEEQ 913

Human   910 TQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALKGLKDLDLNMAEIWE 974
            ||.|||:||:||..||::||.|||||||||||.|||.||:||||.|:|||||||||||::|||||
 Frog   914 TQTLFLKINSSYIFHLRRQLCHLNVINDGGPQYGLVAADIAFYTENVQALKGLKDLDLSLAEIWE 978

Human   975 QKR 977
            |||
 Frog   979 QKR 981

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VPS54NP_057600.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 535..575 27/40 (68%)
Vps54 737..865 CDD:462318 119/127 (94%)
vps54XP_002939365.2 Vps54 741..869 CDD:462318 119/127 (94%)

Return to query results.
Submit another query.