DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZCCHC17 and PRP22

DIOPT Version :10

Sequence 1:NP_001269495.1 Gene:ZCCHC17 / 51538 HGNCID:30246 Length:263 Species:Homo sapiens
Sequence 2:NP_010929.3 Gene:PRP22 / 856732 SGDID:S000000815 Length:1145 Species:Saccharomyces cerevisiae


Alignment Length:228 Identity:63/228 - (27%)
Similarity:102/228 - (44%) Gaps:42/228 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    45 VAMVTDYGAFIKIPGCRKQ---GLVHRTHMSSCRVDKPSEIVDVGDKVWVKLIGREMKNDRIKVS 106
            |..:|.:|.|::|.|.|.:   ||||.:.||..|...|.::|..|..::|::|  :::|:. |:|
Yeast   185 VRNITTFGCFVQIFGTRMKNCDGLVHISEMSDQRTLDPHDVVRQGQHIFVEVI--KIQNNG-KIS 246

Human   107 LSMKVVNQGTGKDLDPNNVIIEQEERRRRSFQDYTGQ----KITLEAVLNTTCKKCGCKGHFAKD 167
            ||||.::|.:|:....|.   |..|.|.||...:|.:    ||...|:  |:.::...:...|..
Yeast   247 LSMKNIDQHSGEIRKRNT---ESVEDRGRSNDAHTSRNMKNKIKRRAL--TSPERWEIRQLIASG 306

Human   168 CFMQPGGTKYSLIPDEEEEKEEAKSAEFEKPDPTRNPSRKR--------KKEKKKKKHRDRKSSD 224
            .         :.|.|..|.|:|.       |..|...:.||        ..||...|..:::..:
Yeast   307 A---------ASIDDYPELKDEI-------PINTSYLTAKRDDGSIVNGNTEKVDSKLEEQQRDE 355

Human   225 SDSSDSESDTGKRARHTSKDS--KAAKKKKKKK 255
            :|..|.|.:|....:.. ||.  |.|||.:..|
Yeast   356 TDEIDVELNTDDGPKFL-KDQQVKGAKKYEMPK 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZCCHC17NP_001269495.1 S1_pNO40 45..108 CDD:240191 22/65 (34%)
PRP22NP_010929.3 GH2_like <12..58 CDD:425380
GH2_like 75..136 CDD:409667
S1_DHX8_helicase 178..257 CDD:240189 27/74 (36%)
HrpA 483..>1097 CDD:441249
Blue background indicates that the domain is not in the aligned region.

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