DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZCCHC17 and rha-1

DIOPT Version :10

Sequence 1:NP_001269495.1 Gene:ZCCHC17 / 51538 HGNCID:30246 Length:263 Species:Homo sapiens
Sequence 2:NP_495890.2 Gene:rha-1 / 174417 WormBaseID:WBGene00004355 Length:1301 Species:Caenorhabditis elegans


Alignment Length:41 Identity:10/41 - (24%)
Similarity:16/41 - (39%) Gaps:11/41 - (26%)


- Green bases have known domain annotations that are detailed below.


Human   196 EKPDPTRNPSRKRKKEKKKKKHRDRKSSDSDSSDSESDTGK 236
            |:||           :||:||.......|.:..:...|.|:
 Worm   586 EEPD-----------QKKRKKGGPPPPDDDEGDEEVDDKGR 615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZCCHC17NP_001269495.1 S1_pNO40 45..108 CDD:240191
rha-1NP_495890.2 DSRM_DHX9_rpt1 4..73 CDD:380683
DSRM_DHX9_rpt2 169..244 CDD:380684
DEAD-like_helicase_N 325..562 CDD:475120
HrpA 380..>897 CDD:441249 10/41 (24%)
OB_NTP_bind 1005..1087 CDD:400182
Blue background indicates that the domain is not in the aligned region.

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