DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SFMBT1 and Sfmbt1

DIOPT Version :10

Sequence 1:NP_057413.2 Gene:SFMBT1 / 51460 HGNCID:20255 Length:866 Species:Homo sapiens
Sequence 2:NP_113835.2 Gene:Sfmbt1 / 58967 RGDID:61999 Length:863 Species:Rattus norvegicus


Alignment Length:866 Identity:767/866 - (88%)
Similarity:811/866 - (93%) Gaps:3/866 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNGEQQLDADAGSGMEEVELSWEDYLEETGSTAVPYGSFKHVDTRLQNGFAPGMKLEVAVRTDPE 65
            ||||||||||.|||:|..|.||||||||||:|..||.||||||..||:|||||||||||:|.|||
  Rat     1 MNGEQQLDADLGSGVEVEEFSWEDYLEETGATTAPYASFKHVDICLQSGFAPGMKLEVALRKDPE 65

Human    66 TYWVATVITTCEQLLLLRYDGYGEDRRADFWCDIRKADLYPIGWCEQNKKTLEAPEGIRDKVSDW 130
            |||||||||.|||||||||:||||||:||||||||:|.|||||||:|||||||||||||||||||
  Rat    66 TYWVATVITACEQLLLLRYEGYGEDRKADFWCDIRRAGLYPIGWCQQNKKTLEAPEGIRDKVSDW 130

Human   131 DEFLRQTLIGACSPPVPLLEGLRNGRNPLDLIAPGSRLECQAFQDSLSTWIVTVVENIGGRLKLR 195
            ..||::||.|||.|||.||||||||||||||||||||||||.|:||:|||||||||||||||||:
  Rat   131 SAFLQRTLTGACGPPVALLEGLRNGRNPLDLIAPGSRLECQDFRDSVSTWIVTVVENIGGRLKLQ 195

Human   196 YEGLESSDNYEHWLYYLDPFLHHVGWAAQQGYELQPPSAIRHLKNEAEWQEILAKVKEEEEEPLP 260
            |||||..|.:|||||||||||||:|||||||||||||.|||||||||:||||||:||  ||||||
  Rat   196 YEGLERHDGFEHWLYYLDPFLHHIGWAAQQGYELQPPLAIRHLKNEADWQEILARVK--EEEPLP 258

Human   261 SYLFKDKQVIGIHTFSVNMKLEAVDPWSPFGISPATVVKVFDEKYFLVEMDDLRPENHARRSFVC 325
            ||||||||||..|.||:|||||||||||||||||||:.||||:||||||:||||||:||||||||
  Rat   259 SYLFKDKQVIRTHEFSINMKLEAVDPWSPFGISPATIAKVFDDKYFLVEIDDLRPEDHARRSFVC 323

Human   326 HADSPGIFPVQWSLKNGLHISPPPGYPSQDFDWADYLKQCGAEAAPQRCFPPLISEHEFKENMKL 390
            ||:|||||||||||||||||:||||:.||||||||||||||||||||:|||..:|||:|||||||
  Rat   324 HANSPGIFPVQWSLKNGLHINPPPGFRSQDFDWADYLKQCGAEAAPQKCFPQSVSEHQFKENMKL 388

Human   391 EAVNPILPEEVCVATITAVRGSYLWLQLEGSKKPIPECIVSVESMDIFPLGWCETNGHPLSTPRR 455
            |||||:.||||.:||:||||||||||||||||||:||.|||||||:|||||||||||||||||||
  Rat   389 EAVNPLFPEEVSIATVTAVRGSYLWLQLEGSKKPVPEFIVSVESMNIFPLGWCETNGHPLSTPRR 453

Human   456 ARVYKQRKIAVVQPEKQVPSSRTVHEGLRNQELNSTESVMINGKYCCPKIYFNHRCFSGPYLNKG 520
            ||.:|.|||||||||||:.|||||||||:|| |||..||||||||||||||||||||||||||||
  Rat   454 ARGHKLRKIAVVQPEKQILSSRTVHEGLKNQ-LNSPHSVMINGKYCCPKIYFNHRCFSGPYLNKG 517

Human   521 RIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRA 585
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   518 RIAELPQCVGPGNCVLVLREVLTLLINAAYKPSRVLRELQLDKDSVWHGCGEVLKAKYKGKSYRA 582

Human   586 TVEIVKTADRVTEFCRQTCIKLECCPNLFGPRMVLDKCSENCSVLTKTKYTHYYGKKKNKRIGRP 650
            |||||:||||||||||||||||||||||||||||||.||||||||||||||||||||||||||||
  Rat   583 TVEIVRTADRVTEFCRQTCIKLECCPNLFGPRMVLDTCSENCSVLTKTKYTHYYGKKKNKRIGRP 647

Human   651 PGGHSNLACALKKASKRRKRRKNVFVHKKKRSSASVDNTPAGSPQGSGGEDEDDPDEGDDDSLSE 715
            |||||||:|||||.|||||||||:||||||||||||||||.|||||||||||||.|:||||||:|
  Rat   648 PGGHSNLSCALKKTSKRRKRRKNIFVHKKKRSSASVDNTPVGSPQGSGGEDEDDADDGDDDSLTE 712

Human   716 GSTSEQQDELQEESEMSEKKSCSSSPTQSEISTSLPPDRQRRKRELRTFSFSDDENKPPSPKEIR 780
            ||||||||||.||||:|||||||.||||||:||.||||.|..|||.:|.|.||.|||||||||||
  Rat   713 GSTSEQQDELHEESEVSEKKSCSPSPTQSEMSTPLPPDTQTDKREAQTSSLSDGENKPPSPKEIR 777

Human   781 IEVAERLHLDSNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGP 845
            |||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   778 IEVDERLHLDSNPLKWSVADVVRFIRSTDCAPLARIFLDQEIDGQALLLLTLPTVQECMDLKLGP 842

Human   846 AIKLCHHIERIKFAFYEQFAN 866
            |||||||||||||||||||||
  Rat   843 AIKLCHHIERIKFAFYEQFAN 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SFMBT1NP_057413.2 MBT 1 20..120 83/99 (84%)
Antigenic epitope 34..42 5/7 (71%)
MBT_SFMBT1_rpt1 47..140 CDD:439101 79/92 (86%)
MBT 2 128..232 87/103 (84%)
MBT_SFMBT1_rpt2 159..257 CDD:439103 83/97 (86%)
MBT 3 242..348 90/105 (86%)
MBT_SFMBT1_rpt3 273..366 CDD:439105 81/92 (88%)
MBT 4 356..453 83/96 (86%)
MBT_SFMBT1_rpt4 382..471 CDD:439107 76/88 (86%)
SLED 502..617 CDD:463469 113/114 (99%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 641..777 115/135 (85%)
SAM_Scm-like-4MBT1,2 782..866 CDD:188980 82/83 (99%)
Sfmbt1NP_113835.2 MBT 1 20..120 83/99 (84%)
MBT 47..140 CDD:459242 79/92 (86%)
MBT 2 128..232 87/103 (84%)
MBT_SFMBT1_rpt2 159..255 CDD:439103 83/97 (86%)
MBT 3 242..346 90/105 (86%)
MBT_SFMBT1_rpt3 271..364 CDD:439105 81/92 (88%)
MBT 4 354..451 83/96 (86%)
MBT 380..469 CDD:459242 76/88 (86%)
SLED 499..614 CDD:463469 113/114 (99%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 638..773 114/134 (85%)
SAM_Scm-like-4MBT1,2 779..863 CDD:188980 82/83 (99%)

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