DRSC/TRiP Functional Genomics Resources

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Protein Alignment HPCAL4 and CG5890

DIOPT Version :9

Sequence 1:NP_001269325.1 Gene:HPCAL4 / 51440 HGNCID:18212 Length:191 Species:Homo sapiens
Sequence 2:NP_001356889.1 Gene:CG5890 / 43126 FlyBaseID:FBgn0039380 Length:229 Species:Drosophila melanogaster


Alignment Length:182 Identity:76/182 - (41%)
Similarity:121/182 - (66%) Gaps:6/182 - (3%)


- Green bases have known domain annotations that are detailed below.


Human     7 KLAPEVLEDLVQNTEFSEQELKQWYKGFLKDCPSGILNLEEFQQLYIKFFPYGDASKFAQHAFRT 71
            |..|..||||.:.|:|::||::..|:||..:||.|:::.:.|:.:|.||||:|::|.:|.:.|:.
  Fly    23 KPIPVALEDLCRQTKFTKQEIRVMYRGFKTECPEGVVHEDCFKDIYAKFFPHGNSSLYAHYVFKA 87

Human    72 FDKNGDGTIDFREFICALSVTSRGSFEQKLNWAFEMYDLDGDGRITRLEMLEIIEAIYKMVGTVI 136
            ||.|.:|.|.||:.:..||...|||..::|.|.|::|||:|||||:|.|:.|||.||::::|   
  Fly    88 FDVNCNGAISFRDLLVTLSTLLRGSVYERLRWTFKLYDLNGDGRISRGELSEIILAIHELMG--- 149

Human   137 MMRMNQ--DGLTPQQRVDKIFKKMDQDKDDQITLEEFKEAAKSDPSIVLLLQ 186
             .|.:|  |....:.:||::|:|:|.::|..||:|||.||...|..:...||
  Fly   150 -RRPHQPEDDRKARDQVDRVFRKLDLNQDGIITIEEFLEACLKDDLVTRSLQ 200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HPCAL4NP_001269325.1 FRQ1 13..181 CDD:227455 72/169 (43%)
CG5890NP_001356889.1 FRQ1 29..192 CDD:227455 71/166 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165143269
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000038
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X31
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.840

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