DRSC/TRiP Functional Genomics Resources

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Protein Alignment SNX9 and VPS5

DIOPT Version :10

Sequence 1:NP_057308.1 Gene:SNX9 / 51429 HGNCID:14973 Length:595 Species:Homo sapiens
Sequence 2:NP_014712.2 Gene:VPS5 / 854235 SGDID:S000005595 Length:675 Species:Saccharomyces cerevisiae


Alignment Length:672 Identity:134/672 - (19%)
Similarity:245/672 - (36%) Gaps:168/672 - (25%)


- Green bases have known domain annotations that are detailed below.


Human    14 EPGNNELTVNEGEIITITNPDVGGGWLE-GRNIKGERGLVPTDYVEILPSDGKDQFSCGNSVA-D 76
            |..:|||...........:.|....|.: |.::.|...|...|     .|...|..   ||:| :
Yeast    41 ERKDNELLETTASFADKIDLDSAPEWKDPGLSVAGNPQLEEHD-----NSKADDLI---NSLAPE 97

Human    77 QAFLDSLSASTAQASSSAASNNHQ-VGSGNDPW----SAWSASKSGNWESSEGW--GAQP----E 130
            |..:..|..||.|..::..|.... .|:.|.|.    :.:.|:.|.|...|...  ..:|    :
Yeast    98 QDPIADLKNSTTQFIATRESGGALFTGNANSPLVFDDTIYDANTSPNTSKSISGRRSGKPRILFD 162

Human   131 GAGAQRNTNTPNNWDTAFGHPQAYQGPATGDDDDWDEDWDGP----KSSSYFKDSESADAGGAQR 191
            .|.||||:...::....         ..|..||.....:..|    :..:.|.:....|....:.
Yeast   163 SARAQRNSKRNHSLKAK---------RTTASDDTIKTPFTDPLKKAEKENEFVEEPLDDRNERRE 218

Human   192 GNSRASSSSMK--------IPLNKFP----GFAKPGTEQYLLAKQLAKPK--EKIPIIVGDYGPM 242
            .|....::|::        .||...|    ..:.| .|....:::..|.|  .|:|         
Yeast   219 NNEGKFTASVEKNILEQVDRPLYNLPQTGANISSP-AEVEENSEKFGKTKIGSKVP--------- 273

Human   243 WVYPTS---TFDCVVADPRKGSKMYGLKSYIEYQLTPTNT-----NRSVNHRYKHFDWLYERLLV 299
               ||.   .|...|.||.|..::..:  ::||.:...::     ...|:.||:.|.|||.:|..
Yeast   274 ---PTEKAVAFKVEVKDPVKVGELTSI--HVEYTVISESSLLELKYAQVSRRYRDFRWLYRQLQN 333

Human   300 K-FGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRD----- 358
            . :|..||.|  |:||..|.|:|.||:.|..::::.:.::|:.||:.:.:.|..||...|     
Yeast   334 NHWGKVIPPP--PEKQSVGSFKENFIENRRFQMESMLKKICQDPVLQKDKDFLLFLTSDDFSSES 396

Human   359 -EKEWKTGKRKA-ERDELAGVMIFSTMEPEAPDLDLVEIEQKCE--------------------- 400
             ::.:.||.... :.::|:.|.|        .::.|:..|...|                     
Yeast   397 KKRAFLTGSGAINDSNDLSEVRI--------SEIQLLGAEDAAEVLKNGGIDAESHKGFMSISFS 453

Human   401 AVGKFTKAMDDGVKELLTVGQEHWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAIT 465
            ::.|:.:|.:..:::         |:....|....:|:.|:|:.:.|        ....|..:..
Yeast   454 SLPKYNEADEFFIEK---------KQKIDELEDNLKKLSKSLEMVDT--------SRNTLAASTE 501

Human   466 EAGKTYEEIASLVAEQPKKDLHFLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKIT 530
            |.....|.:|||...:|..:|             |..|.|:..:.|.::|:....:.|  |..:.
Yeast   502 EFSSMVETLASLNVSEPNSEL-------------LNNFADVHKSIKSSLERSSLQETL--TMGVM 551

Human   531 LQDKQNMVKRV-------SIMSY---ALQAEMNHFHS------NRIY---------DYNSVIRLY 570
            |.|....:..|       |.:.|   .::.:||..||      ..|:         ::.::.|.|
Yeast   552 LDDYIRSLASVKAIFNQRSKLGYFLVVIENDMNKKHSQLGKLGQNIHSEKFREMRKEFQTLERRY 616

Human   571 LEQQVQFYETIAEKLRQALSRF 592
            ...:.| ::.:.:|::.....|
Yeast   617 NLTKKQ-WQAVGDKIKDEFQGF 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNX9NP_057308.1 SH3_SNX9 4..60 CDD:212831 10/46 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..201 21/124 (17%)
Critical for tubulation activity 201..213 3/23 (13%)
PX_SNX9 250..375 CDD:132818 37/137 (27%)
BAR_SNX9 386..595 CDD:153352 41/253 (16%)
VPS5NP_014712.2 PX_Vps5p 281..390 CDD:132771 34/112 (30%)
BAR_Vps5p 460..673 CDD:153311 37/211 (18%)

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