DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNX9 and Snx9

DIOPT Version :10

Sequence 1:NP_057308.1 Gene:SNX9 / 51429 HGNCID:14973 Length:595 Species:Homo sapiens
Sequence 2:XP_038946688.1 Gene:Snx9 / 683687 RGDID:1584466 Length:659 Species:Rattus norvegicus


Alignment Length:624 Identity:541/624 - (86%)
Similarity:569/624 - (91%) Gaps:33/624 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     4 KARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTDYVEILPSDGKDQF 68
            :|||||||||||||||||||||||||||||:||||||||:|.|||:||||||||||||:||||.|
  Rat    37 EARVMYDFAAEPGNNELTVNEGEIITITNPNVGGGWLEGKNSKGEQGLVPTDYVEILPNDGKDPF 101

Human    69 SCGNSVADQAFLDSLSASTAQASSSAASNNHQ-------------------------------VG 102
            ||||||||||||||||||||||:||:|::|:|                               ||
  Rat   102 SCGNSVADQAFLDSLSASTAQANSSSANSNNQVDIWAQVGCVESLSQSPPSSSSSSPSSSINKVG 166

Human   103 SGNDPWSAWSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDTAFGHPQAYQGPATGDDDDWDE 167
            .|:||||||:|.:||||:||:.||.:.:|||||||::. |||||.||||||||||||||||:|||
  Rat   167 GGSDPWSAWNAPRSGNWDSSDAWGTRTDGAGAQRNSSA-NNWDTGFGHPQAYQGPATGDDDEWDE 230

Human   168 DWDGPKSSS-YFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAKQLAKPKEK 231
            |||.||||| ||||||.|:|||.|||||||.:||||:||||||||||||.|||||||||||||||
  Rat   231 DWDDPKSSSPYFKDSEPAEAGGIQRGNSRAGASSMKLPLNKFPGFAKPGMEQYLLAKQLAKPKEK 295

Human   232 IPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYER 296
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   296 IPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWLYER 360

Human   297 LLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRDEKE 361
            |||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||||
  Rat   361 LLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVVSESEVFQQFLNFRDEKE 425

Human   362 WKTGKRKAERDELAGVMIFSTMEPEAPDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQEHWKR 426
            |||||||||:|||.|||||||||||||||||:||||||:||||||||||||||||||||||||||
  Rat   426 WKTGKRKAEKDELVGVMIFSTMEPEAPDLDLIEIEQKCDAVGKFTKAMDDGVKELLTVGQEHWKR 490

Human   427 CTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLHFLME 491
            ||||||||||||||||||||.||||||||||||||:|||||||||||||||||||||||||||||
  Rat   491 CTGPLPKEYQKIGKALQSLAAVFSSSGYQGETDLNNAITEAGKTYEEIASLVAEQPKKDLHFLME 555

Human   492 CNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEMNHFH 556
            |||||||||||||||||.|||||||||||||||||||||.||||.|||||..|||||||||||||
  Rat   556 CNHEYKGFLGCFPDIIGAHKGAIEKVKESDKLVATSKITPQDKQTMVKRVGTMSYALQAEMNHFH 620

Human   557 SNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM 595
            |||||||||||||||||||||||||||||||||.|||||
  Rat   621 SNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALGRFPVM 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNX9NP_057308.1 SH3_SNX9 4..60 CDD:212831 50/55 (91%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..201 80/141 (57%)
Critical for tubulation activity 201..213 10/11 (91%)
PX_SNX9 250..375 CDD:132818 122/124 (98%)
BAR_SNX9 386..595 CDD:153352 198/208 (95%)
Snx9XP_038946688.1 SH3_SNX9 37..93 CDD:212831 50/55 (91%)
COG5391 200..>421 CDD:227680 205/221 (93%)
PX_SNX9 314..439 CDD:132818 122/124 (98%)
BAR_SNX9 450..659 CDD:153352 198/208 (95%)

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