DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SNX9 and snx9b

DIOPT Version :10

Sequence 1:NP_057308.1 Gene:SNX9 / 51429 HGNCID:14973 Length:595 Species:Homo sapiens
Sequence 2:XP_021324123.1 Gene:snx9b / 558917 ZFINID:ZDB-GENE-031118-50 Length:620 Species:Danio rerio


Alignment Length:628 Identity:395/628 - (62%)
Similarity:467/628 - (74%) Gaps:41/628 - (6%)


- Green bases have known domain annotations that are detailed below.


Human     1 MATKARVMYDFAAEPGNNELTVNEGEIITITNPDVGGGWLEGRNIKGERGLVPTDYVEILPSDGK 65
            |.:||:|:||||||||||||:|.|||.|||||.::||||:|.||.:||.||||.||:||  :..:
Zfish     1 MESKAQVLYDFAAEPGNNELSVREGETITITNQNIGGGWIEARNSRGEVGLVPEDYIEI--NQAQ 63

Human    66 DQFSCGNSV-ADQAFLDS---LSASTAQASSS----------------AASNNHQVGSGNDPWSA 110
            ...|.||:. .|.:|.||   ..|||||...:                .:::..:..:|||||:.
Zfish    64 PLTSGGNAAPLDLSFFDSHVPTPASTAQVDVAQPESPVTPVTPVTPGFTSTSPDETSNGNDPWAV 128

Human   111 WSASKSGNWESSEGWGAQPEGAGAQRNTNTPNNWDT-AFGHPQAYQGP-----------ATGDDD 163
            :..:.||.:  |..|.|||||....:.:|. |.|.: ..|||||||||           :..:||
Zfish   129 FDNNASGGF--SNNWAAQPEGTETGKTSNN-NAWQSGGHGHPQAYQGPDIYPYPCLIDLSGAEDD 190

Human   164 DWDEDWDGPKSSSYFKDSESADAGGAQRGNSRASSSSMKIPLNKFPGFAKPGTEQYLLAKQLAKP 228
            :|||:||..|||..:.:||:.:.|...||.  |..|||||.|||||||:|.|.|.|||:||..| 
Zfish   191 EWDEEWDDMKSSGGYAESEAGEGGAMNRGG--AHGSSMKIALNKFPGFSKSGPELYLLSKQQTK- 252

Human   229 KEKIPIIVGDYGPMWVYPTSTFDCVVADPRKGSKMYGLKSYIEYQLTPTNTNRSVNHRYKHFDWL 293
            ..|:.:..|:.||:|.||....|||||||:|||||||||||||||:.||.||:.|||||||||||
Zfish   253 GNKLSVYSGEVGPVWAYPDYQLDCVVADPKKGSKMYGLKSYIEYQVIPTTTNKPVNHRYKHFDWL 317

Human   294 YERLLVKFGSAIPIPSLPDKQVTGRFEEEFIKMRMERLQAWMTRMCRHPVISESEVFQQFLNFRD 358
            |||||.|||||||||.|||||||||||||||||||||||.||:|||||||:|.|||||.||:::|
Zfish   318 YERLLDKFGSAIPIPCLPDKQVTGRFEEEFIKMRMERLQGWMSRMCRHPVVSSSEVFQLFLSYKD 382

Human   359 EKEWKTGKRKAERDELAGVMIFSTMEPEA-PDLDLVEIEQKCEAVGKFTKAMDDGVKELLTVGQE 422
            ||:|||||||||:||..|||||||:|||. ||:||:|:|||||...:||||||||||:|||||.|
Zfish   383 EKDWKTGKRKAEKDETVGVMIFSTIEPEGLPDMDLIEVEQKCEQFSRFTKAMDDGVKDLLTVGNE 447

Human   423 HWKRCTGPLPKEYQKIGKALQSLATVFSSSGYQGETDLNDAITEAGKTYEEIASLVAEQPKKDLH 487
            ||||||||||||||:||||.|:|::||::|||:||..|.||:|.|||||||||.:||||||||||
Zfish   448 HWKRCTGPLPKEYQRIGKAFQNLSSVFTTSGYEGEGTLTDAMTAAGKTYEEIAQMVAEQPKKDLH 512

Human   488 FLMECNHEYKGFLGCFPDIIGTHKGAIEKVKESDKLVATSKITLQDKQNMVKRVSIMSYALQAEM 552
            ||||.|:||||.||||||.||.||.|||||||:||||...|||..||..|.||.|.|||||||||
Zfish   513 FLMETNNEYKGLLGCFPDTIGVHKAAIEKVKEADKLVTAGKITASDKTTMGKRASTMSYALQAEM 577

Human   553 NHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFPVM 595
            ||||:|||||||.|::.||||||:|||.||||||||.|:|..|
Zfish   578 NHFHNNRIYDYNRVMQQYLEQQVKFYEMIAEKLRQAHSQFTTM 620

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SNX9NP_057308.1 SH3_SNX9 4..60 CDD:212831 40/55 (73%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 91..201 43/137 (31%)
Critical for tubulation activity 201..213 10/11 (91%)
PX_SNX9 250..375 CDD:132818 105/124 (85%)
BAR_SNX9 386..595 CDD:153352 156/209 (75%)
snx9bXP_021324123.1 SH3_SNX9 4..60 CDD:212831 41/57 (72%)
PX_SNX9 274..399 CDD:132818 105/124 (85%)
BAR_SNX9 411..620 CDD:153352 155/208 (75%)

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