DRSC/TRiP Functional Genomics Resources

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Protein Alignment ACTL6B and Arp3

DIOPT Version :10

Sequence 1:NP_057272.1 Gene:ACTL6B / 51412 HGNCID:160 Length:426 Species:Homo sapiens
Sequence 2:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster


Alignment Length:447 Identity:116/447 - (25%)
Similarity:195/447 - (43%) Gaps:91/447 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    13 ALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPR- 76
            |.|.|:|:...:.|:||...|:...|:.:.:..:...|                 |||...:.: 
  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVG-----------------DTNTRRITKG 54

Human    77 ---------------DGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNT 126
                           .|..:..|:::|::|||:.....|:....|::::||..|..|::|.|.||
  Fly    55 IEDLDFFIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNT 119

Human   127 RAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRS--------TGLVLDSGATHTTAIPVHDGY 183
            ...||...|:|||.:|:|..::...|||...|:..|        ||:|:|||...|..|||.:||
  Fly   120 PENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGY 184

Human   184 VLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWH 248
            |:...|...|:||..|:...:.|.:|..:.|.|...:...:.:          |||        |
  Fly   185 VIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAI----------KEK--------H 231

Human   249 NYMCNEVIQDFQASVLQVSDSPYDEQVA---AQMPTVHYEMPNGYNTDYGAERLRIPEGLFDP-- 308
            .|:|.::.::|         :.||.:..   .....|:......:|.|.|.||...||..|.|  
  Fly   232 CYICPDIAKEF---------AKYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEF 287

Human   309 SNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSM 373
            ||     .:..:.:..:|...|..|.||:|..||.:::::||:|:.:.|..||.|::.:.....:
  Fly   288 SN-----PDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRL 347

Human   374 RLKLIASNSTME-------------RKFSPWIGGSILASLGTFQQMWISKQEYEEGG 417
            |:....|...::             ::::.|.|||:|||...|.|:..:|..|||.|
  Fly   348 RISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYG 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTL6BNP_057272.1 ASKHA_NBD_Arp4_ACTL6-like 8..417 CDD:466846 115/445 (26%)
Essential for mediating its function in dendritic development, may contribute to neuronal-specific targeting. /evidence=ECO:0000250|UniProtKB:Q99MR0 39..82 5/58 (9%)
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 116/447 (26%)

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