DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ACTL6B and Arp6

DIOPT Version :10

Sequence 1:NP_057272.1 Gene:ACTL6B / 51412 HGNCID:160 Length:426 Species:Homo sapiens
Sequence 2:NP_511165.1 Gene:Arp6 / 32514 FlyBaseID:FBgn0011741 Length:398 Species:Drosophila melanogaster


Alignment Length:434 Identity:91/434 - (20%)
Similarity:188/434 - (43%) Gaps:64/434 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    14 LVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPRDG 78
            :|.|.|:.:.:.|.|.:|.|.. .|..:  :.|:........|::..:.:    ||:||:     
  Fly     6 VVLDNGAHTAKVGLANQDEPHV-VPNCI--MKAKSERRRAFVGNQIDECR----DTSALY----- 58

Human    79 AEVMSPLKNGMIEDWECFRAILDHTYSKH-VKSEPNLHPVLMSEAPWNTRAKREKLTELMFEQYN 142
              .:...:.|.:.:|...:.:.|:.:||. :........::::|...|.::.:|...|::||:|.
  Fly    59 --YILAFQRGYLLNWHTQKTVWDYIFSKDGIGCSLENRNIVITEPQMNFQSIQEATLEILFEEYK 121

Human   143 IPAFFLCKTAVLTAF-----ANGRST-----GLVLDSGATHTTAIPVHDGYVLQQGIVKSPLAGD 197
            :...:....|.|.||     :..|:|     .:::|.|.:.|..:|...|..:.|||.:..:.|.
  Fly   122 VDGVYKTTAADLAAFNYVADSEERTTMESLNCIIIDVGYSFTHVVPFVLGRRVLQGIRRIDMGGK 186

Human   198 FISMQCRELFQEMAIDIIPPYMIA--AKEPV-------REGAPPNWKKKEKLPQVSKSWHNYMCN 253
            .::.|.:||.....::::....:.  .||.|       ::....:: .:||..:|:..:      
  Fly   187 ALTNQLKELISYRHLNVMDESHVVNQIKEDVCFVAEDFKQAMQVHY-SEEKRREVTVDY------ 244

Human   254 EVIQDF---QASVLQVSDSPYDEQVAAQMPTVHYEMPNGYNTDYGAERLRIPEGLFDPSNVKGLS 315
             |:.||   :...::|...|.:::...||.::            ..||..:||.||:||::    
  Fly   245 -VLPDFTTVKRGYVRVPGKPREDEEQQQMVSL------------CNERFTVPELLFNPSDI---- 292

Human   316 GNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSMRLKLIAS 380
            |...:|:...|...:..|..:....|..::::.||:....||..||.|:|....|..:.:.||..
  Fly   293 GVQQVGIPEAVADCLKACPWEAHRELLLNILIVGGSAQFPGFLPRLKRDLRALVPDDLEVSLICP 357

Human   381 NSTMERKFSPWIGGSILASLGTFQQMWISKQEYEEGGKQCVERK 424
            ...:.   ..|.||..:|:...|::...::.:|||.|.|.:.::
  Fly   358 EDPVR---YAWYGGKEVATSPNFEEFVYTQDDYEEYGFQGINQR 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ACTL6BNP_057272.1 ASKHA_NBD_Arp4_ACTL6-like 8..417 CDD:466846 89/425 (21%)
Essential for mediating its function in dendritic development, may contribute to neuronal-specific targeting. /evidence=ECO:0000250|UniProtKB:Q99MR0 39..82 6/42 (14%)
Arp6NP_511165.1 ASKHA_NBD_Arp6 5..391 CDD:466816 89/425 (21%)

Return to query results.
Submit another query.