DRSC/TRiP Functional Genomics Resources

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Protein Alignment ZMYND10 and wdr-60

DIOPT Version :10

Sequence 1:NP_056980.2 Gene:ZMYND10 / 51364 HGNCID:19412 Length:440 Species:Homo sapiens
Sequence 2:NP_001367569.1 Gene:wdr-60 / 175676 WormBaseID:WBGene00016165 Length:668 Species:Caenorhabditis elegans


Alignment Length:300 Identity:60/300 - (20%)
Similarity:108/300 - (36%) Gaps:72/300 - (24%)


- Green bases have known domain annotations that are detailed below.


Human    91 RVEDFKPQNTFPIYMVVHHEASIINLLETVFFHKEVCESAEDTVLDLVDYCHRKLTLLVAQSGCG 155
            :||: |||....:...|..|::|:..|.|....:... |.:.|:...:....     :..||...
 Worm    78 KVEE-KPQKESKVEAEVSFESNIMQRLATSHMRRTEA-SPKPTIAPKISNAQ-----ITVQSTID 135

Human   156 GPPEGEGSQDSNPMQE------LQKQAELMEFEIALKALSVLRYITDCVDSL-----SL-STLSR 208
            ..|....:::....||      |.|...|:..|:...     :..||...::     || |..|.
 Worm   136 NKPYSYHNEEERQTQEQRAFGRLNKLRGLISIEVTKS-----QVFTDLSSNIFEPFNSLPSNKSH 195

Human   209 MLSTHNLPCLLVEL-------------LEHSPWSRREGGKLQQFEGSRWHTVAPSEQQKLSKLDG 260
            .|:.....|...|:             ..||..:|.|.|    .|..|..|    ::.:|.|...
 Worm   196 ALTQTGKDCHTEEVQTERGETEEKETQCPHSESTRIEDG----IEKERTST----DRARLKKFFF 252

Human   261 QVWIALYNLLLSPEAQA------RYCLTSFAKG----RLLK---------LRAFLTDTLL----- 301
            .....:..:|:|.:..|      ...::.|::|    ||.:         :|...:|::|     
 Worm   253 AATQTIREILISEDKSAEEDETREKSISKFSRGYNPFRLCQVVTKSKSTCIRKGESDSVLVAYEI 317

Human   302 --DQLPNLAHLQSFLAHLTLTETQPPKKDLVLEQIPEIWE 339
              ...|:|.: :|.:....:.:.:|||:..|:|.|..:.|
 Worm   318 FESPAPDLIN-KSLIVEFFVHKRRPPKRLFVVESIVSVME 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ZMYND10NP_056980.2 Interaction with DNAAF11 366..440
zf-MYND 394..430 CDD:460312
wdr-60NP_001367569.1 None
Blue background indicates that the domain is not in the aligned region.

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