DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOOK1 and Girdin

DIOPT Version :10

Sequence 1:NP_056972.1 Gene:HOOK1 / 51361 HGNCID:19884 Length:728 Species:Homo sapiens
Sequence 2:NP_647780.1 Gene:Girdin / 38385 FlyBaseID:FBgn0283724 Length:1381 Species:Drosophila melanogaster


Alignment Length:732 Identity:175/732 - (23%)
Similarity:334/732 - (45%) Gaps:105/732 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    17 SLMIWLQTFNTASPCQDVKQLTSGVAMAQVLHQIDAAWF--------NESWLSRIKEDVGDNWRI 73
            |::.||::      |....:|.:|.......|.|.:.|.        |.|.|:.:.   |.:..|
  Fly    19 SIISWLES------CLPRAELLAGYTSLLDGHIIHSVWLQIDPEPQNNPSELNDLN---GKSLSI 74

Human    74 -KASNVKKVLQGIMSYYHEFLGQQISEALIPD---LNQITECSDPVE-LGRLLQLILGCAINCEK 133
             :|.|.:.|::.:.|::.|.|||.|  .::||   |....|..:.:| :..||.|:||.|:.|..
  Fly    75 ARAKNFECVVRNLKSFFEEELGQTI--LVLPDAFTLGHHPESKNGLEQMKTLLTLLLGAAVQCPN 137

Human   134 KQEHIQNIMTLEESVQHVVMTAIQELMSKEILSSPPNDAVGELEQQ-----LKRALEELQEALAE 193
            |:..|..|..|:...||.::..|:::.....|.. ..|::..|..|     :.|..:|......:
  Fly   138 KELFIARIKELDLETQHAIVGLIKQVTDSHSLVL-TEDSLERLTPQSMYTHILRLTKERDVMYLK 201

Human   194 KEELRQRCEELDMQVTTLQDEKNSLVSENEMMNEKLDQLDG-SFDDPNTVVAKKYFHAQLQLEQL 257
            ..:|  .|.|.:|..:      ::||...:.::......:| :...|::....:..|..::...|
  Fly   202 WIDL--ACVETEMTAS------DNLVECGQGVSVTRSPSNGTATSTPSSSSNSESNHLAVECADL 258

Human   258 QEENFRLEAAKDDYRVHCEELEKQLIEFQHRNDELTSLAEE-------TRALKDEIDVLRATSDK 315
            :.:|.:|....::...:..||.::|.:.:.|.|:|...::|       ..|.:||:|:||..:::
  Fly   259 RSKNRKLRQELEEKSENLLELREELDDKKARFDKLRQESQEWFTEAKRASAYRDEVDILRERAER 323

Human   316 ANKLESTVEIYRQKLQDLNDLRKQVKTLQETNMMYMHNTVSLEEELKK-------ANAARTQLET 373
            |::||..|:.||:||.|.:..:.:|:.|:|.|.:.:.:...|||:|::       |.:..:::..
  Fly   324 ADRLEVEVQKYREKLGDSDFYKSRVEELREDNRVLLESKEMLEEQLQRYRKRSEHAISLESEIIK 388

Human   374 YKRQVQDLHVKLSSESKRADTLAFEMKRLEEKHEALLKEKERLIEQRDTLKETNEELRCSQVQQD 438
            ||:::.|              :|.|......|.|.||:|..:|......|..|.:..:.....:|
  Fly   389 YKQKIND--------------MALERDVDRSKLEELLEENSQLQLVARNLNSTMDLDKSFSENED 439

Human   439 HLNQTDASATKSYENLA---AEIMPVEYREVFIRLQ-------HE--NKMLRLQQEGSE-NERIE 490
            ..|..|.|.::...|.|   |..:.:|.|.:...|:       ||  :|||.|::|..: :.:||
  Fly   440 DCNSGDNSLSEQLTNNAQTRALKLELENRRLTAALEQLKESSFHESTSKMLELEKEKKKLSLKIE 504

Human   491 ELQEQLEQKHRKMNELETEQRLSKERIRELQQQIEDLQKSLQEQGSKSEGESSSKLKQKL---EA 552
            ::||.:.:..::..|||...:.:.|..::||..:::.|||...|..:.|.:     :|||   |.
  Fly   505 QMQENINRLTQQNVELEGVFKNALEENKKLQDAVDNRQKSYDRQSLEREAD-----RQKLSDAEQ 564

Human   553 HMEKLTEVHEELQKKQELIEDLQPDINQNVQ-KINELEAALQKK------DEDMKAMEERYKMYL 610
            |:|.|.:..:.:|...|.|:....|:.:..: |..|||..|:|.      .:.:..:|.|...|.
  Fly   565 HVETLNKEKQRIQTLNESIQRRADDLERLAESKTKELEQYLEKSRQYELTKQKLYEIEARVSTYE 629

Human   611 EKARNVIKTLDPKLNPASAEIMLLRKQLAEKERRIEILESEC-KVAK-FRDYE---EKLIVSAWY 670
            .:..:::|.:. ||...|.:..:   ||.:...|:::...|. |:.| ..|.|   :||:.....
  Fly   630 RENASLLKEVS-KLKEGSEQKSV---QLDDSINRLDVQSKELQKLGKALEDSEQVHQKLVELEKQ 690

Human   671 NKSLAFQKLGMESRLVS 687
            |:.||.|:: ::..::|
  Fly   691 NQELASQRI-IDQEMIS 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOOK1NP_056972.1 Sufficient for interaction with microtubules 1..555 141/586 (24%)
HkD_Hook1 15..163 CDD:411796 42/158 (27%)
Sufficient for homodimerization, interaction wit HOOK2, HOOK3 and AP4M1. /evidence=ECO:0000269|PubMed:32073997 169..444 63/294 (21%)
HOOK 186..719 CDD:461694 128/545 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 481..512 8/31 (26%)
Sufficient for interaction with AKTIP and VPS18. /evidence=ECO:0000269|PubMed:18799622 657..728 9/34 (26%)
GirdinNP_647780.1 HkD_HkRP 15..165 CDD:411794 42/156 (27%)
SMC_prok_B 315..1110 CDD:274008 105/416 (25%)

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