DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PDCD2 and Zfrp8

DIOPT Version :10

Sequence 1:NP_002589.2 Gene:PDCD2 / 5134 HGNCID:8762 Length:344 Species:Homo sapiens
Sequence 2:NP_611890.1 Gene:Zfrp8 / 45021 FlyBaseID:FBgn0021875 Length:347 Species:Drosophila melanogaster


Alignment Length:358 Identity:143/358 - (39%)
Similarity:192/358 - (53%) Gaps:45/358 - (12%)


- Green bases have known domain annotations that are detailed below.


Human     9 VELGFAESAP--AWRLRSEQFPSKVGGRPAWLGAAGLPGPQALACELCGRPLSFLLQVYAPLPGR 71
            ::|||||.:.  || |.:..||||:||:||||....||....|.|..|..|.|||.|:|||....
  Fly     3 IDLGFAEKSDNGAW-LSNRYFPSKLGGQPAWLELEALPPTSQLQCSKCRAPKSFLAQLYAPFEDE 66

Human    72 PDAFHRCIFLFCCREQPC-----CAGLRVFRNQLPRKNDFYSYEPPSE--NPPPETGESVCLQLK 129
            .: |||.|::|.||...|     .:...|.|:||||||.|:|.|.||:  .|.|..   .||:  
  Fly    67 YN-FHRSIYVFLCRNSDCQEAQNASNFTVLRSQLPRKNKFFSEEEPSDVGQPLPAV---PCLK-- 125

Human   130 SGAHLCRVCGCLGPKTCSRCHKAYYCSKEHQTLDWRLGHKQACAQPDHLDHIIPDHNFLFPEFEI 194
               .||..|||..|..||:|...:|||.|||...|. .||..|..|:.... .|....:||||||
  Fly   126 ---KLCAACGCHAPHACSKCKAIHYCSPEHQRAHWP-QHKPNCGAPEVATE-KPLTQIVFPEFEI 185

Human   195 V-----IETEDEIMPEVVEKEDYSEI-----IGSMGEALEEELDS-MAKHESREDKIFQKFKTQI 248
            |     :|:.:|...:.....::.|:     .|.:....|.|:|. .....:.:||.|::||.|.
  Fly   186 VMDSNPVESGEEDKDDEARLAEFQELESSGKTGDLSNVSEAEMDKYFGNSAAADDKTFRQFKKQT 250

Human   249 ALEPEQILRYGRGIAPIWISG-----ENIPQEKDIPDC-PCGAKRILEFQVMPQLLNYLKADRLG 307
            |.||:||:||.||..|:||:.     |:  |...:|:| .||.:|..|||:|||.|..|:.:.| 
  Fly   251 AAEPDQIVRYKRGGQPLWITNTVKTVED--QLNKLPNCIACGGERQFEFQIMPQALTLLEDENL- 312

Human   308 KSIDWGILAVFTCAESCSLGTGYTEEFVWKQDV 340
               |||:|||:|||:||.: .||.||.:.|||:
  Fly   313 ---DWGVLAVYTCAKSCPI-DGYVEELLIKQDI 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCD2NP_002589.2 zf-MYND 135..172 CDD:460312 17/36 (47%)
PDCD2_C 238..339 CDD:461221 50/106 (47%)
Zfrp8NP_611890.1 zf-MYND 128..164 CDD:460312 17/36 (47%)
PDCD2_C 240..340 CDD:461221 50/106 (47%)

Return to query results.
Submit another query.