DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PDC and viaf

DIOPT Version :10

Sequence 1:NP_002588.3 Gene:PDC / 5132 HGNCID:8759 Length:246 Species:Homo sapiens
Sequence 2:NP_524032.2 Gene:viaf / 39364 FlyBaseID:FBgn0036237 Length:240 Species:Drosophila melanogaster


Alignment Length:222 Identity:57/222 - (25%)
Similarity:104/222 - (46%) Gaps:20/222 - (9%)


- Green bases have known domain annotations that are detailed below.


Human    23 KGVINDWRKFKLESQDSDSIPPSKKE-ILRQMSSPQSRNGKDSKERVSRKMSIQEYELIHKEKED 86
            ||:|..  |.|......|.|.....: |.|:...|.:...:|.|   ...||:.|.:.: ::.||
  Fly    17 KGIIGP--KAKEAEITEDQIQKLMDDAIQRRTDLPLNEGQRDKK---IDDMSLDELDEL-EDSED 75

Human    87 ENCLRKYRRQCMQDMHQKLSFGPRYGFVYELETGKQFLETIEKELKITTIVVHIYEDGIKGCDAL 151
            |..|.:||::.:.:| :..:...|:|.|.|: :|:.::..:.|..:...:|:|:|.:|:..|..:
  Fly    76 EAVLEQYRQRRIAEM-RATAEKARFGSVREI-SGQDYVNEVTKAGEGIWVVLHLYANGVPLCALI 138

Human   152 NSSLTCLAAEYPIVKFCKIKASNTGAGDRFSLDVLPTLLIYKGGELISNFISVAEQFAEEFFAGD 216
            :..:..||..:|..||  :::..|.....|....|||:.||..|.|...:|...|...::..|.:
  Fly   139 HHHMQQLAVRFPQTKF--VRSVATTCIPNFPEKNLPTIFIYHEGALRKQYIGPLELRGDKLTAEE 201

Human   217 VESFLNEYGLLPEREVHVLEHTKIEEE 243
            :|..|.:.|.:|         |:|.|:
  Fly   202 LEFMLGQAGAVP---------TEITED 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDCNP_002588.3 Phosducin 1..246 CDD:251094 57/222 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..70 12/47 (26%)
Thioredoxin fold. /evidence=ECO:0000250 111..246 34/133 (26%)
viafNP_524032.2 Phd_like_VIAF 8..210 CDD:239286 52/202 (26%)

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