DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATP5F1D and atp16

DIOPT Version :10

Sequence 1:NP_001678.1 Gene:ATP5F1D / 513 HGNCID:837 Length:168 Species:Homo sapiens
Sequence 2:NP_596259.2 Gene:atp16 / 2540185 PomBaseID:SPBC13E7.04 Length:167 Species:Schizosaccharomyces pombe


Alignment Length:167 Identity:55/167 - (32%)
Similarity:81/167 - (48%) Gaps:15/167 - (8%)


- Green bases have known domain annotations that are detailed below.


Human     3 PAALLRRP-GLGRLVRHARAYAEAAAAPAAASGPNQMSFTFASPTQVFFNGANVRQVDVPTLTGA 66
            |..|:|.| |:       |.||:      |.....::..:.|.|.|..:....|.|||:|...|.
pombe    15 PQGLVRAPFGI-------RGYAQ------AVQKNEKLVLSMALPYQTIYEKVPVTQVDIPAEDGE 66

Human    67 FGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGSIAVNADSSVQLLAEEAVTLDMLDLGAAK 131
            .|||..|||.:|.|:||::.|..|....||||:|.|.......:.:.:...||..|:......|.
pombe    67 MGILKDHVPMIQCLKPGVISVTDESSNKSKYFISGGFAVQQPSNELSITVPEAYKLEDFSSSVAN 131

Human   132 ANLEKAQAELVGTADEATRAEIQIRIEANEALVKALE 168
            ..|||.:||: .::||...||..:|:...|:||:||:
pombe   132 QLLEKHKAEM-NSSDEGVAAEAAVRVSVLESLVRALK 167

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATP5F1DNP_001678.1 F1-ATPase_delta 38..162 CDD:213395 41/123 (33%)
atp16NP_596259.2 F1-ATPase_delta 40..153 CDD:213395 40/113 (35%)

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