DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CDK17 and pef1

DIOPT Version :9

Sequence 1:NP_001163935.1 Gene:CDK17 / 5128 HGNCID:8750 Length:523 Species:Homo sapiens
Sequence 2:NP_587921.1 Gene:pef1 / 2539366 PomBaseID:SPCC16C4.11 Length:288 Species:Schizosaccharomyces pombe


Alignment Length:284 Identity:161/284 - (56%)
Similarity:214/284 - (75%) Gaps:3/284 - (1%)


- Green bases have known domain annotations that are detailed below.


Human   192 YIKLEKLGEGTYATVYKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDI 256
            |.:||||||||||.||||::::|..:||||.||::.:||.|.|||||:||:|:|:|.||::|.|:
pombe     3 YQRLEKLGEGTYAHVYKGQNRVTGEIVALKVIRIDADEGTPSTAIREISLMKELRHPNIMSLSDV 67

Human   257 VHTDKSLTLVFEYLDKDLKQYMDDCGN--IMSMHNVKLFLYQILRGLAYCHRRKVLHRDLKPQNL 319
            :.|:..|.|||||::||||:|||..||  .:....||.|..|:|:|:::||..:|||||||||||
pombe    68 LQTENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVLHRDLKPQNL 132

Human   320 LINEKGELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMAS 384
            |||.:||||||||||||:..:|..|:||||||||||.|||||||..|||.||:|.||||..|||:
pombe   133 LINSRGELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMAT 197

Human   385 GRPLFPGSTVEDELHLIFRLLGTPSQETWPGISSNEEFKNYNFPKYKPQPLINHAPRLDSEGIEL 449
            |||||.||..||:|..||||||||::::|||||...|:|. .||.||.|.|....|..|..|::|
pombe   198 GRPLFAGSNNEDQLLKIFRLLGTPTEQSWPGISLLPEYKP-TFPIYKAQDLAYLFPTFDPLGLDL 261

Human   450 ITKFLQYESKKRVSAEEAMKHVYF 473
            :.:.|:.:.:.|.:.::|::|.:|
pombe   262 LRRMLRLQPELRTTGQDALQHAWF 285

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDK17NP_001163935.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 30..55
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 103..123
STKc_PCTAIRE2 185..493 CDD:143377 161/284 (57%)
pef1NP_587921.1 PKc_like 2..285 CDD:304357 160/282 (57%)
PLN00009 3..285 CDD:177649 160/282 (57%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0594
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24056
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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