DRSC/TRiP Functional Genomics Resources

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Protein Alignment CDKL3 and cdkl1

DIOPT Version :9

Sequence 1:XP_011541731.1 Gene:CDKL3 / 51265 HGNCID:15483 Length:619 Species:Homo sapiens
Sequence 2:XP_012825009.1 Gene:cdkl1 / 100496578 XenbaseID:XB-GENE-6051219 Length:352 Species:Xenopus tropicalis


Alignment Length:354 Identity:155/354 - (43%)
Similarity:214/354 - (60%) Gaps:18/354 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MEMYETLGKVGEGSYGTVMKCKHKNTGQIVAIKIFYERPEQSV-NKIAMREIKFLKQFHHENLVN 64
            ||.||.:||:||||||.|.||::::||||||||.|.|..:..| .|||:|||:.|||..|.||||
 Frog     1 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVN 65

Human    65 LIEVFRQKKKIHLVFEFIDHTVLDELQHYCHGLESKRLRKYLFQILRAIDYLHSNNIIHRDIKPE 129
            |:||||:|:|:|||||:.|||||.||..|..|:....::...:|.|:|:::.|.::.||||:|||
 Frog    66 LLEVFRRKRKLHLVFEYCDHTVLHELDKYPRGVPEHLVKSITWQTLQAVNFCHKHHCIHRDVKPE 130

Human   130 NILVSQSGITKLCDFGFARTLAAPGDIYTDYVATRWYRAPELVLKDTSYGKYVYFGILSAFPRPV 194
            |||:::..:.|||||||||.|..|.|.|||||||||||||||::.||.||.            ||
 Frog   131 NILITRHSVIKLCDFGFARLLTGPSDYYTDYVATRWYRAPELLVGDTQYGP------------PV 183

Human   195 DIWALGCMIIEMATGNPYLPSSSDLDLLHKIVLKVGNLSPHLQNIFSKSPIFAGVVLPQVQHPKN 259
            |:||:||:..|:.:|.|..|..||:|.|:.|....|:|....|.:||.:..|:||.:|..::.:.
 Frog   184 DVWAIGCVFAELLSGIPLWPGKSDVDQLYLIRKSQGDLIARHQQVFSTNQFFSGVSIPDPENMEP 248

Human   260 ARKKYPKLNGLLADIVHACLQIDPADRISSSDLLHHEYFTR-----DGFIEKFMPELKAKLLQEA 319
            ...::|.::.....::..||.:|||.|::...||.|.||..     ||..:......|...|...
 Frog   249 LELRFPNISSQALGLMKGCLHMDPAKRLACQQLLDHPYFDSIRDEGDGVTDSERLSRKQTRLHRK 313

Human   320 KVNSLIKPKESSKENELRKDERKTVYTNT 348
            .:..|....:.:..|.|...|.|..|.||
 Frog   314 YIPGLQHLPQLTSSNILPALESKKCYANT 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CDKL3XP_011541731.1 STKc_CDKL2_3 2..298 CDD:270836 140/296 (47%)
cdkl1XP_012825009.1 STKc_CDKL1_4 2..287 CDD:270837 140/296 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
NCBI 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D245642at7742
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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