DRSC/TRiP Functional Genomics Resources

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Protein Alignment MARCHF2 and CG13442

DIOPT Version :10

Sequence 1:NP_057580.3 Gene:MARCHF2 / 51257 HGNCID:28038 Length:246 Species:Homo sapiens
Sequence 2:NP_611511.3 Gene:CG13442 / 37349 FlyBaseID:FBgn0034546 Length:425 Species:Drosophila melanogaster


Alignment Length:215 Identity:62/215 - (28%)
Similarity:91/215 - (42%) Gaps:45/215 - (20%)


- Green bases have known domain annotations that are detailed below.


Human    32 GPPQYVAQVTSRDGRLLSTVIRALD-----------------TPSDGPF-CRICHEGANGECLLS 78
            |||:..|..:      ::|:...:|                 .||.|.. |||||...|.|.|:|
  Fly   123 GPPKAAATDS------IATLRHCVDGATQCNNLNYESASNESMPSVGSLVCRICHNADNPEQLVS 181

Human    79 PCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFAVEKRPR-----PLTEWLKDPGPRTEKRTL 138
            ||.|.|:|..||..|||.|:|:|..:.||||..::..|:..|     .|..|.   .....:|.|
  Fly   182 PCLCKGSLTYVHVHCLECWISTSRCTTCELCQFQYNTEQTLRYTCLQSLRLWY---SRAMSRRAL 243

Human   139 CCDMVCFLFITPLA-AISGWLCLRGAQDHLRLHSQLEAVGLIALTIALFTIYVLWTLVSFRYHCQ 202
            ..|...|..:|.:| .|.|.| |.|.| :..||:  .:.||..|....:.::.|:..::. |...
  Fly   244 QEDCQMFSLLTLVAFGIIGTL-LVGIQ-YYALHT--HSWGLSKLWTKSWMLFFLFMTITV-YFAN 303

Human   203 LY-------SEWRKTNQKVR 215
            :|       :.|.:..|..|
  Fly   304 IYMLIKSQLTPWYRWWQSAR 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MARCHF2NP_057580.3 Required for inhibition of HIV-1 virus production and VSV G protein expression. /evidence=ECO:0000269|PubMed:29573664 56..116 30/77 (39%)
RING_CH-C4HC3_MARCH2 62..113 CDD:319722 26/51 (51%)
Required for interaction with IKBKG. /evidence=ECO:0000269|PubMed:32935379 121..246 25/103 (24%)
CG13442NP_611511.3 RINGv 166..213 CDD:128983 25/46 (54%)

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