DRSC/TRiP Functional Genomics Resources

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Protein Alignment PDZD11 and a

DIOPT Version :10

Sequence 1:XP_016885057.1 Gene:PDZD11 / 51248 HGNCID:28034 Length:172 Species:Homo sapiens
Sequence 2:NP_524641.1 Gene:a / 43852 FlyBaseID:FBgn0000008 Length:1329 Species:Drosophila melanogaster


Alignment Length:124 Identity:38/124 - (30%)
Similarity:57/124 - (45%) Gaps:28/124 - (22%)


- Green bases have known domain annotations that are detailed below.


Human    53 PPAWIPPHERVHHPDY--------NNELTQFL------------PRTITLKKPPGAQ-LGFNIRG 96
            |||....|   |.|..        :.|:.:.:            |:|||..|.||.: |||:|.|
  Fly  1189 PPAAALMH---HRPSLPVAKLTIRDEEMAEVIRASMSEGSGRCTPKTITFFKGPGLKSLGFSIVG 1250

Human    97 GKAS---QLGIFISKVIPDSDAHRAG-LQEGDQVLAVNDVDFQDIEHSKAVEILKTARE 151
            |:.|   .:|||:..|.|...|...| ||.||:::.:|....|.:.|::.:.:.|..||
  Fly  1251 GRDSPKGNMGIFVKTVFPSGQAADDGTLQAGDEIVEINGNSVQGMSHAETIGLFKNVRE 1309

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PDZD11XP_016885057.1 PDZ_PDZD11-like 78..160 CDD:467234 30/79 (38%)
aNP_524641.1 PDZ_canonical <815..868 CDD:483948
PDZ3_PDZD2-PDZ1_hPro-IL-16-like 1231..1316 CDD:467240 30/79 (38%)
Blue background indicates that the domain is not in the aligned region.

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