DRSC/TRiP Functional Genomics Resources

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Protein Alignment VRK3 and CG9962

DIOPT Version :10

Sequence 1:NP_057524.3 Gene:VRK3 / 51231 HGNCID:18996 Length:474 Species:Homo sapiens
Sequence 2:NP_608697.1 Gene:CG9962 / 33448 FlyBaseID:FBgn0031441 Length:319 Species:Drosophila melanogaster


Alignment Length:232 Identity:67/232 - (28%)
Similarity:113/232 - (48%) Gaps:28/232 - (12%)


- Green bases have known domain annotations that are detailed below.


Human   246 GFGVHQDKYRF--------LVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEY 302
            |.|:.. .|:|        ||:..||.||::...:..:. .|.::||.:|.:::|.||:||.:.|
  Fly    68 GMGIPM-TYQFFSNRRHDVLVMELLGPSLETLFTMCNRR-FSMKTVLMLADQMVDRLEYLHLHHY 130

Human   303 VHGNVTAENIFVDPE-DQSQVTLAGYGFAFRY--CPSGKHVAYVEGSRSPHEGDLEFISMDLHKG 364
            ||.::..||..:... .:.::.|..:|.:.||  ....:||....|::  ..|...:.|::....
  Fly   131 VHRDIKPENFLMGVGLTRHRLHLIDFGLSKRYWDMKENRHVPQRRGTK--WAGTARYASVNALCC 193

Human   365 CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNT-----EDIMKQKQKFVDKPGPFVGPCGHWIRP 424
            ...|||.||:|:||.::..|.|.|||...|||:     |.|::.|...:  |...   |..:  |
  Fly   194 KVQSRRDDLESVGYVLIYLLRGSLPWQGLLPNSKLQKAEMILEMKLSTL--PNSL---CAGY--P 251

Human   425 SETLQKYLKVVMALTYEEKPPYAMLRNNLEALLQDLR 461
            :| ...|:.....|.:||:|.|.|:|....:||.:|:
  Fly   252 NE-FYNYIIYTRQLGFEEEPDYRMIRCTFLSLLFNLK 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VRK3NP_057524.3 zinc_ribbon_2 4..24 CDD:433054
PHA03307 <40..>165 CDD:223039
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 41..152
Nuclear localization signal. /evidence=ECO:0000269|PubMed:14645249 49..64
Protein Kinases, catalytic domain 155..457 CDD:473864 64/226 (28%)
CG9962NP_608697.1 STKc_CK1 17..279 CDD:270918 64/222 (29%)
Blue background indicates that the domain is not in the aligned region.

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