DRSC/TRiP Functional Genomics Resources

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Protein Alignment RAB9B and Rab9b

DIOPT Version :9

Sequence 1:NP_057454.1 Gene:RAB9B / 51209 HGNCID:14090 Length:201 Species:Homo sapiens
Sequence 2:NP_795945.1 Gene:Rab9b / 319642 MGIID:2442454 Length:201 Species:Mus musculus


Alignment Length:201 Identity:197/201 - (98%)
Similarity:199/201 - (99%) Gaps:0/201 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAG 65
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Mouse     1 MSGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAG 65

Human    66 QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVDKED 130
            |||||||||||||||||||||||||||||||||||||||||||||||||:|||||||||||||||
Mouse    66 QERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKVDKED 130

Human   131 RQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLEHCMLGHTIDLNSGSK 195
            |||||||||.||||||:||||||||||||||||||||||||||||||||||||||||||||||||
Mouse   131 RQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLEHCMLGHTIDLNSGSK 195

Human   196 AGSSCC 201
            |.||||
Mouse   196 ASSSCC 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RAB9BNP_057454.1 Rab9 3..172 CDD:206697 165/168 (98%)
Effector region. /evidence=ECO:0000250 36..44 7/7 (100%)
Rab9bNP_795945.1 Rab9 3..172 CDD:206697 165/168 (98%)
Effector region. /evidence=ECO:0000250 36..44 7/7 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83970795
Domainoid 1 1.000 338 1.000 Domainoid score I14097
eggNOG 1 0.900 - - E1_KOG0394
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3136
Inparanoid 1 1.050 408 1.000 Inparanoid score I13578
Isobase 00.000 Not matched by this tool.
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG52476
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004055
OrthoInspector 1 1.000 - - oto118412
orthoMCL 1 0.900 - - OOG6_105995
Panther 1 1.100 - - LDO PTHR47981
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5468
SonicParanoid 1 1.000 - - X2801
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1717.290

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