Protein Alignment RAB9B and rab-1

DIOPT Version :9

• Sequence 1: NP_057454.1
• Gene: RAB9B / 51209
• HGNCID: 14090
• Length: 201
• Species: Homo sapiens
• Sequence 2: NP_503397.1
• Gene: rab-1 / 178620
• WormBaseID: WBGene00004266
• Length: 205
• Species: Caenorhabditis elegans
• Alignment Length: 160
• Identity: 67/160 - (41%)
• Similarity: 101/160 - (63%)
• Gaps: 6/160 - (3%)

Human     7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQERFKS 71
            |.|::|:||.|||||.|:.|:..:.:......||||:|..|.:|:||:.:.||||||||||||::
 Worm    11 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRT 75

Human    72 LRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKVD-KEDRQVTT 135
            :.:.:||||...::.:.:.|:::|.|:..|.:|...||    .|:...:::|||.| ...|.|.|
 Worm    76 ITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYA----CENVNKLLVGNKCDLTAKRAVET 136

Human   136 EEAQTWCMENGDYPYLETSAKDDTNVTVAF 165
            :.||.:..:.| .|:||||||..|||..||
 Worm   137 QAAQDYAGQLG-IPFLETSAKSSTNVEQAF 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RAB9B	NP_057454.1	Rab9	3..172	CDD:206697	67/160 (42%)
		Effector region. /evidence=ECO:0000250	36..44		4/7 (57%)
rab-1	NP_503397.1	Rab1_Ypt1	10..175	CDD:206661	67/160 (42%)
		RAB	12..175	CDD:197555	66/159 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910