DRSC/TRiP Functional Genomics Resources

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Protein Alignment HERC5 and herc56.4

DIOPT Version :10

Sequence 1:NP_057407.2 Gene:HERC5 / 51191 HGNCID:24368 Length:1024 Species:Homo sapiens
Sequence 2:NP_001139103.2 Gene:herc56.4 / 100148091 ZFINID:ZDB-GENE-090311-7 Length:992 Species:Danio rerio


Alignment Length:967 Identity:333/967 - (34%)
Similarity:524/967 - (54%) Gaps:87/967 - (8%)


- Green bases have known domain annotations that are detailed below.


Human    95 KNMKIHSVDQGAEHMLILSSDGKPFEYDNYSMKHLRFESILQEKKIIQITCGDYHSLALSKGGEL 159
            :|.:|.|:..|....::|:.|||....|..::  .|....|:.:::|||.|||.||:|||..|:|
Zfish    74 QNERIRSIVCGEAGAVLLADDGKVLIMDQSTV--CRPLKSLENRQVIQIACGDQHSMALSNDGQL 136

Human   160 FAWGQNLHGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIYSWGKNECGQLG 224
            |.||:|.|||||:.::...|.:||.::.|..:|:||||||..||..||:||.::.||.|..||||
Zfish   137 FVWGENTHGQLGLRKEQAGTQSPQHLQSLCEIPVAQISAGGNHSFVLSLSGVVFGWGSNSAGQLG 201

Human   225 LGHTESKDDPSLIEGLDNQKVEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLV 289
            ||.|:.:..|::::.|..:|...::|||.|:|.|::.|.:||||:|..|||||||.::|..|.|:
Zfish   202 LGDTKDRFVPTIVKSLCGKKTVSISCGGEHTATLSKGGTVFTFGSGGFGQLGHNSLKDEHHPRLI 266

Human   290 AELVGYRVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPVKVSSSEELKLES 354
            |||.|.:|:|:.|||.|||.:......::|||.|..||||||....|.:||||.:.:    :...
Zfish   267 AELWGSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPT----ECTE 327

Human   355 HTSEKELIMIAGGNQSILLWIKKENSYVNLKRT-----IPTLNEGTVKRWIADVETKRWQSTKRE 414
            .|.||   :|||.|.|..|:.|...:.....::     |.|||:..:.||::  |:..|.:.|.|
Zfish   328 FTMEK---LIAGENHSFALFFKNPGNESEKPKSGSNGGILTLNDRMIDRWVS--ESDPWPTIKNE 387

Human   415 IQEIFSSPACLTGSFLRKRR----TTEMMPVYLDLNKARNIFKELTQKDWITNMITTCLKDNLLK 475
            |..:|||.|.|.||||:..|    .|.:....||.:..:..|.:|...   .::|:..::..||.
Zfish   388 INTVFSSAASLNGSFLKTSRDEHYQTSVEHCGLDFDLVKTSFAKLFAS---KSLISEVVQQTLLP 449

Human   476 RLPFHSPPQEALEIFFLLPECPMMHISNNWESLVVPFAKVVCKMSDQSSLVLEEYWATLQESTFS 540
            .|..:....|||.::.||||. :..:......|:...|..:.:::..:..|||.||:.|.:..|.
Zfish   450 SLNPNPTGVEALRLYLLLPEL-INGLKKQRTKLIEALASKILELNSAARKVLEMYWSRLPDDWFE 513

Human   541 KLVQMF---KTAVICQLDYWDESAEENGNVQALLEMLKKLHRVNQVKCQLPESIFQVDELLHRLN 602
            :|:::|   .|.:|.|:  .||:  ::.:.:.|..:|:.|....|:.|.  ..|...|.::|::|
Zfish   514 RLIKLFHKESTDLIDQI--CDET--DHQSTRHLKNILEILQMAYQISCS--TDITHHDFIIHKIN 572

Human   603 FFVEVCRRYLWKMTVD---------ASENVQCCV-----------IFSHFPFIFNNLSKIKLLHT 647
            ..:::    |..:|.|         .:|:....|           |...|||..:.::|.::.: 
Zfish   573 DLLDL----LQTITADLLRMELYMQINEDFHDMVKLEEYYFRTVKILVKFPFASDFITKQRMFN- 632

Human   648 DTLLKIESKKHKAYLRSAAIEEERESEFALRPTFD--LTVRRNHLIEDVLNQLSQFENEDLRKEL 710
              ||:.|..::...|             |:..:|.  |.:.|..::.|.|..|.| ........|
Zfish   633 --LLQEECFRNVPNL-------------AMGNSFSNLLHINRESVLTDTLQYLRQ-NTHSFMHPL 681

Human   711 WVSFSGEIGYDLGGVKKEFFYCLFAEMIQPEYGMFMYPEGASCMWFPVKPKFEKKRYFFFGVLCG 775
            .|:|.||.|.|:.|:..|||..:....|:.:..:....| :|.:||........|.:::.||:||
Zfish   682 QVAFIGEDGIDMRGLSAEFFSLISKSFIEWDKKILEVHE-SSLVWFNPHHTRGNKNFYYLGVICG 745

Human   776 LSLFNCNVANLPFPLALFKKLLDQMPSLEDLKELSPDLGKNLQTLLDDEGDNFEEVFYIHFNVHW 840
            ::|:|.:..|:.||||||||||.|.|||:||:||||...::|:.||:::.:....:.::.|..  
Zfish   746 MALYNRHHINIDFPLALFKKLLQQKPSLDDLEELSPVEARSLKNLLEEDEEEVVNLQHLDFTC-- 808

Human   841 DRNDTNLIPNGSSITVNQTNKRDYVSKYINYIFNDSVKAVYEEFRRGFYKMCDEDIIKLFHPEEL 905
              ....|:||||.|.||:.|::.||..|::..||.|||..:|:|.|||.|.|..|...:||||||
Zfish   809 --KGQELVPNGSQIQVNKVNRQKYVDLYVDLEFNKSVKTQFEQFTRGFSKGCPLDAWTMFHPEEL 871

Human   906 KDVIVGNTDYDWKTFEKNARYEPGYNSSHPTIVMFWKAFHKLTLEEKKKFLVFLTGTDRLQMKDL 970
            ::::.|:..|:||..:::|.|| |.::|...|..||..|.:|:.|.|||||:||.||:|:....|
Zfish   872 QELLHGSPQYNWKELQQSASYE-GCSASDELIKNFWTVFFELSEENKKKFLMFLYGTERVPAGGL 935

Human   971 NN--MKITFC-CPESWNERDPIRALTCFSVLFLPKYSTMETVEEALQEAINNNRGFG 1024
            :.  :||:.. ||:. ::..| .|.|||..|.|||||.:.|:.:.|..|||:...||
Zfish   936 SKRALKISQTDCPDP-DDHLP-EAQTCFERLVLPKYSDINTLHDKLIHAINSCAVFG 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HERC5NP_057407.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
RCC1 1 96..155 21/58 (36%)
ATS1 <140..346 CDD:444065 101/205 (49%)
RCC1 2 156..208 25/51 (49%)
RCC1 3 209..260 21/50 (42%)
RCC1 4 262..312 28/49 (57%)
RCC1 5 314..364 18/49 (37%)
HECTc 681..1024 CDD:238033 132/347 (38%)
herc56.4NP_001139103.2 None
Blue background indicates that the domain is not in the aligned region.

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