DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CRBN and M18.6

DIOPT Version :10

Sequence 1:NP_057386.2 Gene:CRBN / 51185 HGNCID:30185 Length:442 Species:Homo sapiens
Sequence 2:NP_502300.2 Gene:M18.6 / 187461 WormBaseID:WBGene00010891 Length:414 Species:Caenorhabditis elegans


Alignment Length:427 Identity:99/427 - (23%)
Similarity:162/427 - (37%) Gaps:91/427 - (21%)


- Green bases have known domain annotations that are detailed below.


Human    24 ESEEEDEMEVEDQDSKEAKKPNI---INFDTSLPTSHTYLGADMEEFHGRTLHDDDSCQVIPVLP 85
            |||.||..:.||.:.:..:..|:   ..||.:|..:.     :.|.:.......|......|:. 
 Worm     9 ESESEDFYDAEDAEPQAMEGLNVDVTHRFDYALQDNE-----NRENYENEARLTDYGTNWFPIC- 67

Human    86 QVMMILIPGQTLPLQLFHPQEVSMVRNLIQKDRT--FAVLAYSNVQE-----------REAQFGT 137
            .|..:..|||.||:: ||..|..:...|:...|.  |.||...::.|           |..|..:
 Worm    68 GVSAVCFPGQQLPMK-FHDDEREIYERLVSSARANGFVVLFPLDIPECTSLPYIATLSRVVQANS 131

Human   138 TAEIYAYREEQDFGIEIVKVKAIGRQRFKVLELRTQSDGIQQAKVQILPECVLPSTMS------A 196
            .|               :.::.:|..|.|||:...   |..:|:||:||:..|||.:.      |
 Worm   132 NA---------------LSMELMGVYRCKVLKYNL---GRGEAEVQLLPDVELPSLLPSFIPKYA 178

Human   197 VQLESLNKCQI------FPSKPVSREDQCSYKWWQKYQKRKFHCANLTSWPRWLYSLYDAETLMD 255
            :.|.:..|..|      :|...:....:.:..          .|..|.|      .:...:|:  
 Worm   179 IHLPAHEKRSIATRINGYPFNAIRDVTESAVN----------ECVGLLS------GMLGDDTV-- 225

Human   256 RIKKQLREWDENLKDDSLPSNPIDFSYRVAACLPIDDVLRIQLLKIGSAIQRLRCELDIMNKCTS 320
                      ...||..|..    |||..|..:..:.:....|||..||..|:...|    |...
 Worm   226 ----------RQAKDRGLTY----FSYFAAKHIFSNRLTEYSLLKEDSANGRIVAAL----KYFK 272

Human   321 LCCKQCQETEITTKNEIFSLSLCGPMAAYVNPHGYVHETLTVYKACNLNLIGRPSTEHSWFPGYA 385
            :...:|....|........:.|......:||.||:||:...:.:..|.:....||.|.:|||.||
 Worm   273 VFVGRCSRCRIPIFRNEHIMRLPDQTMTHVNAHGFVHKITLLSEIRNYDRATPPSYEFTWFPEYA 337

Human   386 WTVAQCKICASHIGWKFTATKKDMSPQKFWGLTRSAL 422
            |.:.||..|..|:||::.:..::  |::|:|:.|..:
 Worm   338 WIIIQCSRCHEHLGWEYISMTRE--PRRFFGIQREGI 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CRBNNP_057386.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45 7/20 (35%)
LON_substr_bdg 80..317 CDD:426647 56/261 (21%)
CRBN_C_like 321..422 CDD:276940 29/100 (29%)
M18.6NP_502300.2 LON 60..138 CDD:197740 19/94 (20%)
CRBN_C_like 277..372 CDD:276940 29/96 (30%)

Return to query results.
Submit another query.