DRSC/TRiP Functional Genomics Resources

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Protein Alignment VPS28 and Vps28

DIOPT Version :10

Sequence 1:NP_898880.1 Gene:VPS28 / 51160 HGNCID:18178 Length:233 Species:Homo sapiens
Sequence 2:NP_652053.1 Gene:Vps28 / 47408 FlyBaseID:FBgn0021814 Length:210 Species:Drosophila melanogaster


Alignment Length:175 Identity:110/175 - (62%)
Similarity:146/175 - (83%) Gaps:0/175 - (0%)


- Green bases have known domain annotations that are detailed below.


Human    18 PELYEEVKLYKNAREREKYDNMAELFAVVKTMQALEKAYIKDCVSPSEYTAACSRLLVQYKAAFR 82
            |||||||||::||||||||||||:|:|::.|:|.||||||:||::|.|||||||:.|||||.||:
  Fly     6 PELYEEVKLFRNAREREKYDNMADLYAIINTIQQLEKAYIRDCITPQEYTAACSKYLVQYKVAFK 70

Human    83 QVQGSEISSIDEFCRKFRLDCPLAMERIKEDRPITIKDDKGNLNRCIADVVSLFITVMDKLRLEI 147
            |||..|..|::.|.:|||||||.|:|||:|||||||:|||||.::|||::||||||:||||||:|
  Fly    71 QVQCDEFPSVETFVKKFRLDCPAALERIREDRPITIRDDKGNTSKCIAEIVSLFITIMDKLRLQI 135

Human   148 RAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWWVSLPARQS 192
            ..||.:|||:::|.:.|:|:|.:|.||:.:..|.:|..||...|:
  Fly   136 NTMDALQPDVKDLADNMNRLSLIPEDFDAKLKVEKWLGSLNEMQA 180

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
VPS28NP_898880.1 VPS28 39..187 CDD:427639 88/147 (60%)
Vps28NP_652053.1 VPS28 27..207 CDD:427639 91/154 (59%)

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