DRSC/TRiP Functional Genomics Resources

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Protein Alignment CHCHD2 and chchd2

DIOPT Version :10

Sequence 1:NP_001307256.1 Gene:CHCHD2 / 51142 HGNCID:21645 Length:168 Species:Homo sapiens
Sequence 2:NP_001008432.1 Gene:chchd2 / 493261 XenbaseID:XB-GENE-993435 Length:154 Species:Xenopus tropicalis


Alignment Length:157 Identity:121/157 - (77%)
Similarity:128/157 - (81%) Gaps:12/157 - (7%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRGSRSRTSRMAPPASRAPQMRAAPRPAPVAQPPA--AAPPSAVGSSAAAPRQPGLMAQMATTA 63
            |||||||||||:||||||||.||  |.|.|.|.|||  |..|||:|.:|||||||||||||||||
 Frog     1 MPRGSRSRTSRVAPPASRAPAMR--PAPPPAAHPPAPVAQAPSALGPAAAAPRQPGLMAQMATTA 63

Human    64 AGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEPQGTQPAQQQQ------PCLYEIKQFL 122
            ||||||||||||:||||||||.|||:|||||.|||||||  .||..|||      ||.||:||||
 Frog    64 AGVAVGSAVGHTIGHAITGGFGGGSSAEPARADITYQEP--AQPMYQQQQQSQYTPCQYEMKQFL 126

Human   123 ECAQNQGDIKLCEGFNEVLKQCRLANG 149
            ||||||.|:||||||.|||||||.|||
 Frog   127 ECAQNQSDLKLCEGFGEVLKQCRFANG 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHCHD2NP_001307256.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 35/50 (70%)
COG3416 <4..>93 CDD:442642 72/90 (80%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..111 25/33 (76%)
Cx9C motif 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01150 114..124 7/9 (78%)
Cx9C motif 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01150 134..144 8/9 (89%)
chchd2NP_001008432.1 COG3416 <45..>93 CDD:442642 42/47 (89%)
CHCH 118..151 CDD:429096 27/32 (84%)

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