DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CHCHD2 and chchd2

DIOPT Version :10

Sequence 1:NP_001307256.1 Gene:CHCHD2 / 51142 HGNCID:21645 Length:168 Species:Homo sapiens
Sequence 2:NP_957061.1 Gene:chchd2 / 393740 ZFINID:ZDB-GENE-040426-1737 Length:168 Species:Danio rerio


Alignment Length:167 Identity:109/167 - (65%)
Similarity:125/167 - (74%) Gaps:19/167 - (11%)


- Green bases have known domain annotations that are detailed below.


Human     1 MPRGSRSRTSRMAPP--ASRAPQMRAAPRPAPVAQPPAAAPPSAVG-SSAAAPRQPGLMAQMATT 62
            ||||||||||||:||  :|.||..|||| |...|..||..|||||. .:||||||||:.||||:|
Zfish     1 MPRGSRSRTSRMSPPSYSSPAPMARAAP-PRSYAPAPAPPPPSAVAPPAAAAPRQPGMFAQMAST 64

Human    63 AAGVAVGSAVGHTLGHAITGGFSGGSNAEPARPDITYQEP---QGTQPAQQQQ------------ 112
            |||||||||||||:|||:||||.||.::|.||||:|||||   |...|.||||            
Zfish    65 AAGVAVGSAVGHTIGHAMTGGFGGGGHSEAARPDVTYQEPYQGQAMYPPQQQQQPMYQQDPQQQN 129

Human   113 PCLYEIKQFLECAQNQGDIKLCEGFNEVLKQCRLANG 149
            ||.||:|||:||||:|.|:||||||:|||||||.:||
Zfish   130 PCSYEMKQFIECAQSQSDLKLCEGFSEVLKQCRFSNG 166

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CHCHD2NP_001307256.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 32/51 (63%)
COG3416 <4..>93 CDD:442642 63/91 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..111 22/36 (61%)
Cx9C motif 1. /evidence=ECO:0000255|PROSITE-ProRule:PRU01150 114..124 6/9 (67%)
Cx9C motif 2. /evidence=ECO:0000255|PROSITE-ProRule:PRU01150 134..144 8/9 (89%)
chchd2NP_957061.1 None

Return to query results.
Submit another query.