DRSC/TRiP Functional Genomics Resources

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Protein Alignment RLIM and CG6923

DIOPT Version :10

Sequence 1:NP_057204.2 Gene:RLIM / 51132 HGNCID:13429 Length:624 Species:Homo sapiens
Sequence 2:NP_001262484.1 Gene:CG6923 / 41420 FlyBaseID:FBgn0037944 Length:1265 Species:Drosophila melanogaster


Alignment Length:897 Identity:171/897 - (19%)
Similarity:269/897 - (29%) Gaps:357/897 - (39%)


- Green bases have known domain annotations that are detailed below.


Human    10 GSGDQSAAQRRSQMDRLDREEAFYQFVNNLSEEDYRLMRD-----NNLLGTPGESTEEELLRRLQ 69
            ||...|:.|.:.|..|..:||..:        |:.|..:.     :::.|.||||...  ..|.:
  Fly   394 GSPSTSSDQEQEQQQRQQQEEIIH--------EERRHQQSPGQPMHSMYGVPGESRMS--WSRAR 448

Human    70 QIKEGPPPQ--------------------NS-------------DENRGGD-------SSDDVSN 94
            ...:..||:                    ||             ..|..|.       ||...||
  Fly   449 PSDDSVPPRKHARMELPGRSRSKLSSTNFNSFYPGRRGHRTFAEQGNSSGQHHVRFPPSSTPNSN 513

Human    95 GDSIIDWLNSVRQTG-------NTTRSGQRGNQSWRAVS-------------RTNPNSGDFRF-- 137
            |..:|.::...|.:.       .:|.:|:||:...||.|             .::.:..|..|  
  Fly   514 GPCVITYVGRPRDSQPAADLNLPSTSTGRRGSHETRADSVVLTAPDLQLDDWSSDDDDDDVVFVH 578

Human   138 -------SLEINVN-------------------------------RNNGSQNSENENE------- 157
                   |:::..:                               ||:...|.|:.||       
  Fly   579 STREPILSIDLTSDDDGLANDTQLQRDRDRGRERERERARDREPYRNDTQPNPEDPNEDRRTMYD 643

Human   158 -----PSARRSSGENVENNS--------------------------------------------- 172
                 |.|||:......||.                                             
  Fly   644 CAYTFPYARRTDRRTEANNEGTSAFAFYSGALADRAAISDHNYSYELDQLMDPGPGNFYPPRCSN 708

Human   173 ---QRQVENPRSESTSARPSR---------------SERNSTEA--------LTEVPPTRGQRRA 211
               ||.. .|.:||:...|..               .:.:||||        ||..|.:....:.
  Fly   709 MDPQRYF-LPINESSMWMPGHPAPPPPPPPMPPILLPDNSSTEAYLRHQQRNLTSTPSSSSSEQT 772

Human   212 RSRSPDHRRTRARAERSRSP------LHPM------------SEIPRRSHHSISSQTFEHPLVNE 258
            .::...|||:        ||      .||.            |:.|    .|:......||....
  Fly   773 STQQSRHRRS--------SPANVYHRYHPYYYAITTLPTVVESDYP----PSLQPHPHPHPHFQP 825

Human   259 TEGSSRTRHHVTLRQQISGPELLSRGLFAASGTRNASQGAGSSDTAASGESTG-----SGQR-PP 317
            ::|.|.       |..:||    :....|.:.|..|.|....||..:...:.|     .|.| ||
  Fly   826 SQGGSS-------RSSLSG----ALNAAAVAATAAAVQAQTFSDLLSQAHNEGRAAALEGNRTPP 879

Human   318 TIVLDLQVRRVRPGEYRQRDSI-------ASRTR---------------SRSQTPN--------- 351
            ..::..|        ::||.||       ||...               .||..|:         
  Fly   880 HTMVHAQ--------HQQRQSINPPAPGVASNANLAAAVSPPPPLEMYSGRSTIPHCGSPPFSVR 936

Human   352 -NTVTYESERGGFRRTFSRSERAGVRTYVSTIRIPIR--RILNTGLSET-----------TSVAI 402
             :...| |.|..::....:..:|......:.|..|.|  .|:.|.|:..           ...::
  Fly   937 RSEAAY-SNRQHYQPQPHQGHQAPQNQMHAHIHPPHRASAIVATSLTPAPPYPVHQNLWYRQQSM 1000

Human   403 QTMLRQIMTGFGELSYFMYSDSDSEPTGSVSNRNMERAESRSG---------RGGSGGGSSSGSS 458
            |.|.|:.||              ..|....||..:..:..|:|         ...:|..||...:
  Fly  1001 QEMHRRHMT--------------PTPIDLSSNAPLLTSTLRNGYLHSICSCVHARNGPVSSLDPA 1051

Human   459 ----SSSSSSSSSSSSSSSSSSPSSSSGGESSETSSD-----LFEGSNEGSSSSGSSGARREGRH 514
                ..::.::::...|....||::|..|.||..:..     ..:...:..:.......:...|.
  Fly  1052 YYPPYDAAPAAAAPPPSPQQQSPATSGSGNSSVAAQASMRHLQLQPQQQPQAQQSPPVMQHMQRQ 1116

Human   515 RA-----------PVTFDESGSLPFLSLAQFFLLNEDDDDQPRGLTKEQID---------NLAMR 559
            ||           |:.. |.|..| |||....|:.....:  ||.|.|.|:         .:...
  Fly  1117 RAIHHHMFHHHYSPLHL-EIGLAP-LSLGSRILIAPSRPN--RGATLETIERNTLPHKYRRVRRP 1177

Human   560 SFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICR 611
            |..:.||.| |::|:..:...|::|:|||.|.:|..|:|:||..|..|||||
  Fly  1178 SETDEDAEK-CAICLNLFEIENEVRRLPCMHLFHTDCVDQWLVTNKHCPICR 1228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RLIMNP_057204.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 5/14 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 72..251 58/379 (15%)
PHA03307 159..>348 CDD:223039 54/305 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 257..276 3/18 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 291..363 23/109 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 424..522 19/126 (15%)
RING-H2_RNF12 568..618 CDD:438336 20/44 (45%)
PDZ-binding. /evidence=ECO:0000255 621..624
CG6923NP_001262484.1 HRD1 <1155..>1256 CDD:227568 28/75 (37%)
RING-H2_RNF111-like 1185..1230 CDD:438137 20/45 (44%)
Blue background indicates that the domain is not in the aligned region.

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