DRSC/TRiP Functional Genomics Resources

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Protein Alignment SBDS and SDO1

DIOPT Version :10

Sequence 1:NP_057122.2 Gene:SBDS / 51119 HGNCID:19440 Length:250 Species:Homo sapiens
Sequence 2:NP_013122.1 Gene:SDO1 / 850709 SGDID:S000004012 Length:250 Species:Saccharomyces cerevisiae


Alignment Length:251 Identity:107/251 - (42%)
Similarity:167/251 - (66%) Gaps:14/251 - (5%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQV 65
            |.|..|:.||:||||::||:|:|.||||:|||:|||..:|.|:|||||||||.|.||:|||||.|
Yeast     1 MPINQPSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGLV 65

Human    66 AKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTV 130
            |.||||...|||.:..::.::|:.|||:|:|:|||...|.::..::.|||:.||:||.:|:.|..
Yeast    66 ANKEDLQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVSKKRYPP 130

Human   131 ILIERAMKDIHYSVKTNKSTKQQALEVIKQL--KEKMKIERAHMRLRFILPVNEGKKLKEKLKPL 193
            .:|.:|::::.:|...||..|.||||.||.|  |:.:.|.||.|:::  :.::|..:..|.::.:
Yeast   131 TMIHKALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVK--VAISEPSRQPELIEKI 193

Human   194 IKVIES---EDYGQQLE-IVC--LIDPGCFREIDELIKKETKGKGSLEVLNLKDVE 243
            .|:|.|   |....:|: ..|  ||||..:|::..|..|    ||:::||::..::
Yeast   194 SKLIASSPGESTKPELDPWTCTGLIDPVNYRDLMTLCDK----KGTVQVLDMAVID 245

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SBDSNP_057122.2 PTZ00448 1..>223 CDD:185627 101/229 (44%)
SDO1NP_013122.1 RNA_SBDS 9..244 CDD:129392 104/240 (43%)

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