DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SBDS and sbds

DIOPT Version :10

Sequence 1:NP_057122.2 Gene:SBDS / 51119 HGNCID:19440 Length:250 Species:Homo sapiens
Sequence 2:NP_001004953.1 Gene:sbds / 448365 XenbaseID:XB-GENE-1003506 Length:250 Species:Xenopus tropicalis


Alignment Length:250 Identity:216/250 - (86%)
Similarity:234/250 - (93%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQV 65
            |||||||||||||||||||||:.|||||||||||||:.||||.||||||||||||||:|||||||
 Frog     1 MSIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVSKGQV 65

Human    66 AKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTV 130
            ||||||:.:|||:|.||||||||:|||:|||:|||.|||||||||||||||||||||||||||||
 Frog    66 AKKEDLLKSFGTEDPTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVNPETKRPYTV 130

Human   131 ILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIK 195
            .||||||||||||||..||||||||:|||||||.|:|||||||||||||..:|||||||||||||
 Frog   131 NLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFILPAKDGKKLKEKLKPLIK 195

Human   196 VIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDEKFE 250
            ..|||::.|:|||||||||||||||||||:.||||||:||||:||||||||||||
 Frog   196 HTESENFDQELEIVCLIDPGCFREIDELIRCETKGKGTLEVLSLKDVEEGDEKFE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SBDSNP_057122.2 PTZ00448 1..>223 CDD:185627 191/221 (86%)
sbdsNP_001004953.1 PTZ00448 1..>223 CDD:185627 191/221 (86%)

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