DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SBDS and Sbds

DIOPT Version :10

Sequence 1:NP_057122.2 Gene:SBDS / 51119 HGNCID:19440 Length:250 Species:Homo sapiens
Sequence 2:NP_001008290.1 Gene:Sbds / 288615 RGDID:1311043 Length:250 Species:Rattus norvegicus


Alignment Length:250 Identity:243/250 - (97%)
Similarity:247/250 - (98%) Gaps:0/250 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MSIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQV 65
            ||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
  Rat     1 MSIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVSKGQV 65

Human    66 AKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTV 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat    66 AKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVNPETKRPYTV 130

Human   131 ILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVNEGKKLKEKLKPLIK 195
            |||||||||||||||.||||||||||||||||||||||||||||||:||||||||||||||||:|
  Rat   131 ILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVNEGKKLKEKLKPLMK 195

Human   196 VIESEDYGQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLNLKDVEEGDEKFE 250
            |:|||||.||||||||||||||||||||||||||||||||||:||||||||||||
  Rat   196 VVESEDYSQQLEIVCLIDPGCFREIDELIKKETKGKGSLEVLSLKDVEEGDEKFE 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SBDSNP_057122.2 PTZ00448 1..>223 CDD:185627 215/221 (97%)
SbdsNP_001008290.1 PTZ00448 1..>223 CDD:185627 215/221 (97%)

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