DRSC/TRiP Functional Genomics Resources

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Protein Alignment SEPSECS and SecS

DIOPT Version :10

Sequence 1:NP_001397643.1 Gene:SEPSECS / 51091 HGNCID:30605 Length:586 Species:Homo sapiens
Sequence 2:NP_649556.3 Gene:SecS / 40681 FlyBaseID:FBgn0037347 Length:478 Species:Drosophila melanogaster


Alignment Length:553 Identity:221/553 - (39%)
Similarity:319/553 - (57%) Gaps:85/553 - (15%)


- Green bases have known domain annotations that are detailed below.


Human     1 MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKSLALSPRLECSVTISAHCSLRLPGSRH 65
            ||.|.....|:||...|::.|..|:||.:...:.||||.                          
  Fly     1 MNFEQVNIPEKLVPDNYLQLGLAAQRSKQRSFKELLEKR-------------------------- 39

Human    66 SPASASRVAGTTGARHHTRLMFVFLVEMGFHHVGQADLKLLTSSDRPFLAFQSARITGGKCPENG 130
                                                                       |.|:||
  Fly    40 -----------------------------------------------------------KLPKNG 45

Human   131 WDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYRFIHGIGRSGDISAVQPKAAG 195
            |.:..:|..:|.||.:||||:....|:||||.|:|..|||||||.|.||||||||:...||||||
  Fly    46 WSDERIEELVHMLASLDSNNYPHKVGLGEREARIACKLVARRHYNFGHGIGRSGDLLEAQPKAAG 110

Human   196 SSLLNKITNSLVLDIIKLAGVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSC 260
            |:||.::||:|:||:|:..|:.:.|.||:|||.|||:||||..:||.:||.|:|::|.|||||||
  Fly   111 STLLARLTNALILDLIRGIGLPSCAGCFLVPMCTGMTLTLCLQSLRKRRPGARYVLWSRIDQKSC 175

Human   261 FKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAV 325
            ||::...|..||||..:::|:.|.|::.....|::.||.|.|||:::||||||||..|.:.|::.
  Fly   176 FKAITATGLVPVVIPCLIKGESLNTNVDLFREKIKSLGVDSILCLYTTTSCFAPRNSDDIAEVSK 240

Human   326 ICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQE 390
            :...:.|||:||||||:|:.:.::.::...||||||.||||.|||.:||||.||:|.||:|.:.:
  Fly   241 LSKQWQIPHLVNNAYGLQAKEIVNQLECANRVGRIDYFVQSSDKNLLVPVGSAIVASFNESVLHD 305

Human   391 ISKMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYNERLLHTPHNP 455
            ::..|.||||.|.|||||:||||||.||::.|..:|.|.|:||...::|.:|...|.::.:..|.
  Fly   306 VASTYAGRASGSQSLDVLMTLLSLGRNGFRLLFDQRGENFNYLRENLRKFAEPRGEIVIDSRFNS 370

Human   456 ISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLN 520
            ||||:||.||...:.|::|:|||||..|.||||||:..|..:|:.|:.|..|.||.:|....||.
  Fly   371 ISLAITLATLAGDQMKSITKLGSMLHMRGVSGARVIVPGQNKTIDGHEFLDFGSHRSNLQVPYLT 435

Human   521 AASAIGMKMQDVDLFIKRLDRCLKAVRKERSKE 553
            .|:.||:..:::|.|....::|...:.:.::::
  Fly   436 VAAGIGITREEIDKFFDIFNKCWNQIFQTKNEK 468

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SEPSECSNP_001397643.1 selenium_SpcS 12..543 CDD:211833 216/530 (41%)
SecSNP_649556.3 AAT_I 12..457 CDD:450240 216/529 (41%)

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