DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment SEPSECS and Gad1

DIOPT Version :10

Sequence 1:NP_001397643.1 Gene:SEPSECS / 51091 HGNCID:30605 Length:586 Species:Homo sapiens
Sequence 2:NP_523914.2 Gene:Gad1 / 38484 FlyBaseID:FBgn0004516 Length:510 Species:Drosophila melanogaster


Alignment Length:472 Identity:82/472 - (17%)
Similarity:145/472 - (30%) Gaps:182/472 - (38%)


- Green bases have known domain annotations that are detailed below.


Human   190 QPKAAGSSLLNKITNSLVLDIIKLAG------------VHTVANCFVVP---------------- 226
            |.|.......|:::|.  ||:|.:||            .:.:|..|::.                
  Fly    96 QVKTGHPHFFNQLSNG--LDLISMAGEWLTATANTNMFTYEIAPVFILMENVVLTKMREIIGWSG 158

Human   227 ----MATGMSLT--LCFLTLRHKR-PKAK---------YIIWPRIDQ-----KSC---------- 260
                :|.|.|::  ..||..|||. |..|         .::....||     |||          
  Fly   159 GDSILAPGGSISNLYAFLAARHKMFPNYKEHGSVGLPGTLVMFTSDQCHYSIKSCAAVCGLGTDH 223

Human   261 --------FKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP 317
                    ...|||:..|.:::|...:|                   |....:::|.........
  Fly   224 CIVVPSDEHGKMITSELERLILERKAKG-------------------DIPFFVNATAGTTVLGAF 269

Human   318 DRLEELAVICANYDIPHIVNNAYG---VQSSKCMHLIQQGARVGRID-----------AFVQ--- 365
            |.:..:|.||..|:....::.|:|   :.|.|..|....|  |.|.|           |.:|   
  Fly   270 DDINTIADICQKYNCWMHIDAAWGGGLLMSRKHRHPRFTG--VERADSVTWNPHKLMGALLQCST 332

Human   366 ---------------SLDKNFMVPVGGAIIAGFNDSFIQ-----EISKMYPGRASASPSLDVLIT 410
                           |.:..||......|.....|..||     :|.|::             :.
  Fly   333 IHFKEDGLLISCNQMSAEYLFMTDKQYDISYDTGDKVIQCGRHNDIFKLW-------------LQ 384

Human   411 LLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAYN----------------ERLLHTPHNPISLA 459
            ..:.|:.|:::......|:..|...:|::.|:.::                :||...||:.    
  Fly   385 WRAKGTEGFEQQQDRLMELVQYQLKRIREQSDRFHLILEPECVNVSFWYVPKRLRGVPHDA---- 445

Human   460 MTLKTLDEHRDKAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASA 524
                       |...:||.:.   .:...|::..|::..  ||      ...:..|..:.:..|:
  Fly   446 -----------KKEVELGKIC---PIIKGRMMQKGTLMV--GY------QPDDRRPNFFRSIISS 488

Human   525 IGMKMQDVDLFIKRLDR 541
            ..:...|||..:..:.|
  Fly   489 AAVNEADVDFMLDEIHR 505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
SEPSECSNP_001397643.1 selenium_SpcS 12..543 CDD:211833 82/472 (17%)
Gad1NP_523914.2 Pyridoxal_deC 64..434 CDD:395219 65/373 (17%)

Return to query results.
Submit another query.