DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL1 and atl1

DIOPT Version :9

Sequence 1:NP_056999.2 Gene:ATL1 / 51062 HGNCID:11231 Length:558 Species:Homo sapiens
Sequence 2:XP_012824050.2 Gene:atl1 / 779669 XenbaseID:XB-GENE-945669 Length:558 Species:Xenopus tropicalis


Alignment Length:556 Identity:496/556 - (89%)
Similarity:531/556 - (95%) Gaps:0/556 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDK 65
            ||:||::|||||||:::.|:|||||||..|||.|||||:|||||||||||.||||||||||||||
 Frog     1 MARNRKERNSWGGFTDRNYDWSSEEEEYEKKAHPVQVLVVKDDHSFELDEAALNRILLSEAVRDK 65

Human    66 EVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIF 130
            |||||||||||||||||||||||||||..::|||:|||||||:||||||||||||||||||||||
 Frog    66 EVVAVSVAGAFRKGKSFLMDFMLRYMYKTDTVDWLGDYNEPLSGFSWRGGSERETTGIQIWSEIF 130

Human   131 LINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTE 195
            |:..|||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   131 LVENPDGNKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTE 195

Human   196 YGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSC 260
            ||||||||||||||||||||||||||||||.||:|||.||||||||||.||||||||||||||||
 Frog   196 YGRLAMEETFLKPFQSLIFLVRDWSFPYEFPYGSDGGNKFLEKRLKVSENQHEELQNVRKHIHSC 260

Human   261 FTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGL 325
            ||||||||:|||||.|||||||||||||||:|||||||:.||||||||:||:|||:||:||||||
 Frog   261 FTNISCFLMPHPGLTVATNPNFDGKLKEIDEEFIKNLKVFIPWLLSPENLDVKEISGNRITCRGL 325

Human   326 VEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTK 390
            ||||||||||||||||||||||||||||||||||||||||.|||.|||:||||:|||||.|||.:
 Frog   326 VEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDLYNKNMEEVCGGDRPFLAPTDLQQR 390

Human   391 HLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVI 455
            |..||||:||||||||||||||||||||||||:||||||:|||||||||||||||||||||||||
 Frog   391 HQHLKEEAVKLFRGVKKMGGEEFSRRYLQQLENEIDELYVQYIKHNDSKNIFHAARTPATLFVVI 455

Human   456 FITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGST 520
            |||||:|.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Frog   456 FITYVLAAVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGST 520

Human   521 NEALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKK 556
            |||||||||||||||||||.|||.|::::.|::|:|
 Frog   521 NEALYKLYSAAATHRHLYHHAFPVPQADAAEETERK 556

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL1NP_056999.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 17/25 (68%)
GBP 43..314 CDD:308078 248/270 (92%)
Sufficient for membrane association 448..558 97/109 (89%)
atl1XP_012824050.2 GBP 43..314 CDD:308078 248/270 (92%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 510 1.000 Domainoid score I3580
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H9302
Inparanoid 1 1.050 1025 1.000 Inparanoid score I2984
NCBI 1 1.000 - -
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - oto152883
Panther 1 1.100 - - LDO PTHR10751
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1010.160

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