DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL1 and Atl1

DIOPT Version :10

Sequence 1:NP_056999.2 Gene:ATL1 / 51062 HGNCID:11231 Length:558 Species:Homo sapiens
Sequence 2:NP_001009831.1 Gene:Atl1 / 362750 RGDID:1359232 Length:558 Species:Rattus norvegicus


Alignment Length:558 Identity:543/558 - (97%)
Similarity:551/558 - (98%) Gaps:0/558 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDK 65
            |||:|||||||||||||:.:|||||||||:||||||||||||||||||||.||||||||||||||
  Rat     1 MAKSRRDRNSWGGFSEKSSDWSSEEEEPVRKAGPVQVLIVKDDHSFELDEAALNRILLSEAVRDK 65

Human    66 EVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIF 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|
  Rat    66 EVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVF 130

Human   131 LINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTE 195
            ||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 LINKLDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTE 195

Human   196 YGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSC 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 YGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSC 260

Human   261 FTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGL 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 FTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGL 325

Human   326 VEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTK 390
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 LEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTK 390

Human   391 HLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVI 455
            ||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 HLQLKEDSVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVI 455

Human   456 FITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGST 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 FITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGST 520

Human   521 NEALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKKKM 558
            ||||||||||||||||||.||||.||||.|||.||||:
  Rat   521 NEALYKLYSAAATHRHLYQQAFPAPKSEPTEQPEKKKI 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL1NP_056999.2 N-terminal hypervariable region (HVR). /evidence=ECO:0000269|PubMed:34546351 1..34 27/32 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 21/25 (84%)
GBP 43..314 CDD:460516 267/270 (99%)
3HB (three-helix bundle) domain. /evidence=ECO:0000269|PubMed:21220294, ECO:0000269|PubMed:21368113, ECO:0000269|PubMed:23334294, ECO:0000269|PubMed:34546351, ECO:0000269|PubMed:38509071 347..438 89/90 (99%)
Linker. /evidence=ECO:0000269|PubMed:38509071 439..447 7/7 (100%)
Autoinhibitory domain. /evidence=ECO:0000269|PubMed:34817557 521..558 32/36 (89%)
Atl1NP_001009831.1 N-terminal hypervariable region (HVR). /evidence=ECO:0000250|UniProtKB:Q8WXF7 1..34 27/32 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 23/27 (85%)
GBP 43..314 CDD:460516 267/270 (99%)
3HB (three-helix bundle) domain. /evidence=ECO:0000250|UniProtKB:Q8WXF7 347..438 89/90 (99%)
Linker. /evidence=ECO:0000250|UniProtKB:Q8WXF7 439..447 7/7 (100%)
Autoinhibitory domain. /evidence=ECO:0000250|UniProtKB:Q8WXF7 521..558 32/36 (89%)

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