DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ATL1 and Atl1

DIOPT Version :9

Sequence 1:NP_056999.2 Gene:ATL1 / 51062 HGNCID:11231 Length:558 Species:Homo sapiens
Sequence 2:NP_001009831.1 Gene:Atl1 / 362750 RGDID:1359232 Length:558 Species:Rattus norvegicus


Alignment Length:558 Identity:543/558 - (97%)
Similarity:551/558 - (98%) Gaps:0/558 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     1 MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDHSFELDETALNRILLSEAVRDK 65
            |||:|||||||||||||:.:|||||||||:||||||||||||||||||||.||||||||||||||
  Rat     1 MAKSRRDRNSWGGFSEKSSDWSSEEEEPVRKAGPVQVLIVKDDHSFELDEAALNRILLSEAVRDK 65

Human    66 EVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEIF 130
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||:|
  Rat    66 EVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGDYNEPLTGFSWRGGSERETTGIQIWSEVF 130

Human   131 LINKPDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTE 195
            ||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   131 LINKLDGKKVAVLLMDTQGTFDSQSTLRDSATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTE 195

Human   196 YGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSC 260
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   196 YGRLAMEETFLKPFQSLIFLVRDWSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSC 260

Human   261 FTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGL 325
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   261 FTNISCFLLPHPGLKVATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGL 325

Human   326 VEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTK 390
            :||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   326 LEYFKAYIKIYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTK 390

Human   391 HLQLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVI 455
            ||||||:||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   391 HLQLKEDSVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPATLFVVI 455

Human   456 FITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGST 520
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Rat   456 FITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVIDQVAAALWDQGST 520

Human   521 NEALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKKKM 558
            ||||||||||||||||||.||||.||||.|||.||||:
  Rat   521 NEALYKLYSAAATHRHLYQQAFPAPKSEPTEQPEKKKI 558

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATL1NP_056999.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27 21/25 (84%)
GBP 43..314 CDD:308078 267/270 (99%)
Sufficient for membrane association 448..558 105/109 (96%)
Atl1NP_001009831.1 Redistribution to soluble cell fraction. /evidence=ECO:0000250 1..447 435/445 (98%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..29 23/27 (85%)
GBP 43..314 CDD:280433 267/270 (99%)
Sufficient for membrane association. /evidence=ECO:0000250 448..558 105/109 (96%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C83697592
Domainoid 1 1.000 542 1.000 Domainoid score I6047
eggNOG 1 0.900 - - E1_KOG2037
HGNC 1 1.500 - -
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9302
Inparanoid 1 1.050 1095 1.000 Inparanoid score I4737
NCBI 1 1.000 - -
OMA 1 1.010 - - QHG58971
OrthoDB 1 1.010 - - D1027269at2759
OrthoFinder 1 1.000 - - FOG0001595
OrthoInspector 1 1.000 - - oto135426
orthoMCL 1 0.900 - - OOG6_102856
Panther 1 1.100 - - LDO PTHR10751
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1147
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1717.310

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