DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMED5 and eca

DIOPT Version :10

Sequence 1:NP_057124.3 Gene:TMED5 / 50999 HGNCID:24251 Length:229 Species:Homo sapiens
Sequence 2:NP_788616.1 Gene:eca / 41177 FlyBaseID:FBgn0069242 Length:216 Species:Drosophila melanogaster


Alignment Length:209 Identity:48/209 - (22%)
Similarity:90/209 - (43%) Gaps:38/209 - (18%)


- Green bases have known domain annotations that are detailed below.


Human    38 FTLPAGQKECFYQPMPLKASLEIEYQV-------------LDGAGLDIDFHLASPEGKTLVFEQR 89
            |.:...:::||.:.:|.:.::.:.|:|             ..|.|:.::  :...:.|.::....
  Fly    23 FHISETERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE--VRDSDDKIVLSRVY 85

Human    90 KSDG-----VHTVETEVGDYMFC-FDNTFSTISEKVIFFELILDNMGEQAQEQED--WKKYITGT 146
            .|.|     .||    .|:::.| |.|:.:..|...:...|.: .:||.|.:...  .|:.:|. 
  Fly    86 SSQGRISFTSHT----PGEHVICMFSNSTAWFSGAQLRVHLDI-QVGEHAIDYAHVAQKEKLTE- 144

Human   147 DILDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSA 211
              |.:::..:|:.:..|...       |...|..|.|.|:..||...||.:||:...||:|.:..
  Fly   145 --LQLRIRQLLDQVEQITKE-------QNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMGF 200

Human   212 IQVYMLKSLFEDKR 225
            .|:..|||.||.|:
  Fly   201 WQMRHLKSFFEAKK 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED5NP_057124.3 EMP24_GP25L 35..222 CDD:426051 45/204 (22%)
ecaNP_788616.1 EMP24_GP25L 20..211 CDD:426051 45/204 (22%)

Return to query results.
Submit another query.