DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMED5 and CG9308

DIOPT Version :10

Sequence 1:NP_057124.3 Gene:TMED5 / 50999 HGNCID:24251 Length:229 Species:Homo sapiens
Sequence 2:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster


Alignment Length:222 Identity:56/222 - (25%)
Similarity:106/222 - (47%) Gaps:33/222 - (14%)


- Green bases have known domain annotations that are detailed below.


Human    11 VLLLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFH 75
            ||:|     ||...|.||..:||:..|.        |||....:...:.:.::|::|...|:...
  Fly     6 VLVL-----VLFQAACGFIVTLDAHETM--------CFYDHANVSDKVTVSFEVMEGGFKDVGVE 57

Human    76 LASPEGKTLVFEQRKSDGVHT-VETEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDW 139
            :|.|:...|...::.:.|..| ...:.|.|..||||..||::.|::.|:.   ::....:...|.
  Fly    58 IAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLCFDNKMSTMTPKILMFQF---HVARAIEFYMDS 119

Human   140 KKYITGTDILDMKLEDILE--SINSIKSRLS-KSGHIQTLLRAFEARDR-NIQESNFD--RVNFW 198
            .|          :::|::|  ::.|:.::|| |.|.::........|.| :::.|:..  ||..|
  Fly   120 SK----------RVDDVIEQATVQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAW 174

Human   199 SMVNLVVMVVVSAIQVYMLKSLFEDKR 225
            |:...:::::.:.::||.||..||.||
  Fly   175 SIFGPMMLIITAVLEVYYLKHFFEVKR 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED5NP_057124.3 EMP24_GP25L 35..222 CDD:426051 42/193 (22%)
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 46/201 (23%)

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