DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMED5 and opm

DIOPT Version :10

Sequence 1:NP_057124.3 Gene:TMED5 / 50999 HGNCID:24251 Length:229 Species:Homo sapiens
Sequence 2:NP_572994.1 Gene:opm / 32435 FlyBaseID:FBgn0264389 Length:242 Species:Drosophila melanogaster


Alignment Length:225 Identity:93/225 - (41%)
Similarity:135/225 - (60%) Gaps:9/225 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     5 IWLPFPVLLLAALPPVLLPGAAGFTPSLDSDFTFTLPAGQKECFYQPMPLKASLEIEYQVLDG-- 67
            |||..|.|:|......||.|... ..:.|.:.|..:.||:.||.|..:....:::.||||:||  
  Fly     4 IWLGMPGLVLLLSIAALLLGVQD-AEAYDKEMTVYVDAGKTECLYHSVRQGETIDFEYQVIDGGH 67

Human    68 AGLDIDFHLASPEGKTLVFEQRKSDGVHTVE-TEVGDYMFCFDNTFSTISEKVIFFELILDNMGE 131
            ..|||.|.|..|.|..:|.:.:|.:.||..| .:.|||.|||||:||..:.|.:|||||::..||
  Fly    68 GDLDISFTLLDPIGLVIVSDFKKPENVHRHEVAKEGDYRFCFDNSFSMFNRKTVFFELIVEREGE 132

Human   132 QAQEQEDWKK--YITG---TDILDMKLEDILESINSIKSRLSKSGHIQTLLRAFEARDRNIQESN 191
            :.|....|.:  .:||   .:..|||::||::.|..|:.:|:|:..:|.:||:.||||||:.|||
  Fly   133 ELQGDTQWNEADELTGLSRDEYYDMKVQDIMDFIGRIRLQLTKARQLQDVLRSHEARDRNLAESN 197

Human   192 FDRVNFWSMVNLVVMVVVSAIQVYMLKSLF 221
            |.:||.||||.:..|:.|..|||:||:|:|
  Fly   198 FQKVNHWSMVQISAMIGVGLIQVFMLRSIF 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED5NP_057124.3 EMP24_GP25L 35..222 CDD:426051 83/195 (43%)
opmNP_572994.1 EMP24_GP25L 33..227 CDD:426051 82/193 (42%)

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