DRSC/TRiP Functional Genomics Resources

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Protein Alignment TMED5 and p24-1

DIOPT Version :10

Sequence 1:NP_057124.3 Gene:TMED5 / 50999 HGNCID:24251 Length:229 Species:Homo sapiens
Sequence 2:NP_572754.1 Gene:p24-1 / 32140 FlyBaseID:FBgn0030341 Length:210 Species:Drosophila melanogaster


Alignment Length:195 Identity:56/195 - (28%)
Similarity:89/195 - (45%) Gaps:12/195 - (6%)


- Green bases have known domain annotations that are detailed below.


Human    35 DFTFTLPAGQKECFYQPMPLKASLEIEYQVLDGAGLDIDFHLASPEGKTLV-FEQRKSDGVHTVE 98
            :|||.|.....:|||:.:...:|...|:||..|..||:|..|..|:||.:. .|:...|....|.
  Fly    21 EFTFDLADNAVDCFYEEIKKNSSAYFEFQVSAGGQLDVDVTLKDPQGKVIYSLEKATFDSHQFVA 85

Human    99 TEVGDYMFCFDNTFSTISEKVIFFELILDNMGEQAQEQEDWKKYITGTDILDMKLEDILESINSI 163
            ...|.|..||.|.||..|.|:::.:.   .:||:..        :.|.|.....|..:..|..:|
  Fly    86 ETTGVYTACFGNQFSAFSHKIVYVDF---QVGEEPA--------LPGVDEHATVLTQMETSSQAI 139

Human   164 KSRLSKSGHIQTLLRAFEARDRNIQESNFDRVNFWSMVNLVVMVVVSAIQVYMLKSLFEDKRKSR 228
            ...|:.....||..|..||:.|...|....||..||.:....::|:..:|:.:|::.|.|::.|:
  Fly   140 HKGLNDILDAQTHHRLREAQGRKRAEDLNQRVMVWSSLETAAVIVIGLVQIMVLRNFFTDRKPSQ 204

Human   229  228
              Fly   205  204

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMED5NP_057124.3 EMP24_GP25L 35..222 CDD:426051 53/187 (28%)
p24-1NP_572754.1 EMP24_GP25L 21..197 CDD:426051 53/186 (28%)

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